Pairwise Alignments

Query, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 567 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 85/406 (20%), Positives = 178/406 (43%), Gaps = 49/406 (12%)

Query: 51  VILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIVEVGQP 110
           ++L F+  I+  S      V +      P  + + +Q    G V +I  +  Q V+ G P
Sbjct: 193 LVLGFIGTIILTSFLKYKVVVKAPALIRPIGETRLVQAAVEGKVRQIAVRSNQEVQQGDP 252

Query: 111 LLRLDETRFASNVGETEADRLAMALRVERLSAEVEDRPLIIDEKLRKAAPNQAA-SEESL 169
           ++ +D+++       T+ D+L  ++   +L             KL++    +AA +EE L
Sbjct: 253 IIVIDDSQQI-----TKRDQLIDSIAKNQL-------------KLQQIESQKAAIAEEML 294

Query: 170 YQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVATGAIS 229
            +S +     ++     Q  +    L      R Q  ++   +  ++ + E L A+  ++
Sbjct: 295 AESNKVARGIDVNQADIQTAEANLALAADEYSRYQTLSNAGAIA-DLLVQEKL-ASFRVA 352

Query: 230 QVEVLRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLNEARTE 289
           Q  + R R    E   Q +   LA    +A +R++Q ++ +      SE L Q+   + E
Sbjct: 353 QANLSRAR----ELTAQTEEQGLA---TQARLRQMQDQLAQQE----SETLQQIKVEQKE 401

Query: 290 LNKATATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEA 349
           L +       ++  +  T+V +P+ GI++ + +     V+  G ++  + P    L I+A
Sbjct: 402 LQQ-------MNINLANTVVRAPISGIIQSINLRNPDQVVGVGQEVARIFPTQSGLTIKA 454

Query: 350 KILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADT--------ITDED--KKT 399
            +  ++I  +  GQ   ++  A  Y  +G L  K++ I  D+         T+E     +
Sbjct: 455 LVPSQNILPVALGQRVQLRIAACPYPDFGTLDGKVQAIAPDSGGSSSSAAQTNEPVAANS 514

Query: 400 TYYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMSYLLK 445
             Y + ++ +   L   ++   I PGM A  DI+T ++T++ ++L+
Sbjct: 515 QAYEVTIKPEDRSLTDGQRVCKIRPGMDAEADIITNEETVLKFMLR 560