Pairwise Alignments

Query, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  204 bits (518), Expect = 7e-57
 Identities = 122/429 (28%), Positives = 219/429 (51%), Gaps = 8/429 (1%)

Query: 36  LIEDAPRVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVA 95
           ++ D+ + +R     +++ F  L +WA+ AP+       G  +  S  + +Q+LEGGI+ 
Sbjct: 64  VVTDSRQTIRAGWLIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIK 123

Query: 96  EIFAKEGQIVEVGQPLLRLDETRFASNVGETEADRLAMALRVERLSAEVEDRP------- 148
           EI  KEG  V  G PL+RL+ T+  ++                RL AE +++        
Sbjct: 124 EILVKEGDRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPD 183

Query: 149 LIIDEKLRKAAPNQAASEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANS 208
           LI   KL+        +++  +  R + ++ ++  LQ+++ Q +QE+     +R      
Sbjct: 184 LIAVAKLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQ 243

Query: 209 LELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKI 268
           LE+ + EI     L+A G   +  +L + R      G++ +   ++ RAE A+ E + +I
Sbjct: 244 LEIFQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQI 303

Query: 269 EETRGKFRSEALTQLNEARTELNKATATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGV 328
            +TR +FR + + QL E +T+L++         D + RT++ +   G+++ L V+T+GG+
Sbjct: 304 IQTRQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGI 363

Query: 329 IQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIG 388
           I+PG  ++E+VP DD LVIEA+I P+DI  + PG +  V+F+A++      +   L Q+ 
Sbjct: 364 IKPGETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVS 423

Query: 389 ADTITDEDKKTTYYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMSYLLKPIM 448
           AD   +E   ++YY  ++      L      L +  GM   V I TG++T++ Y LKP+ 
Sbjct: 424 ADRFVNERDSSSYYKARIEVSDEEL-AKLGGLALRAGMPVDVMIKTGERTVLHYFLKPLE 482

Query: 449 KARSEALRE 457
            A    L E
Sbjct: 483 DALFHGLIE 491