Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 648 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N1B4

 Score =  962 bits (2486), Expect = 0.0
 Identities = 491/648 (75%), Positives = 553/648 (85%)

Query: 1   MSLFKQLLLAICLFLVVAFSGSFMVSLESSRSQYVNQLRSHAQDAATALALSLTPNIDDP 60
           MSLFKQLL+AICLFLVVAF+GSFMVSLESSR+QYVNQLRSHAQDAATALALSLTPNIDDP
Sbjct: 1   MSLFKQLLIAICLFLVVAFTGSFMVSLESSRTQYVNQLRSHAQDAATALALSLTPNIDDP 60

Query: 61  AMVELMVSSIFDSGYYASIKVVDLGSNAVLVERHAEPDPGGVPLWFVRLIGLEAAGGDAI 120
           AMVEL+VSSIFDSGYYASI+VVDL ++  +VER   P    VP WFV+LIGLE AGGDA+
Sbjct: 61  AMVELLVSSIFDSGYYASIRVVDLANDKTIVERSGIPAVTNVPDWFVKLIGLEPAGGDAL 120

Query: 121 VSRGWQQAARVEVISHPMFAIAKLWQSALGSLGWLLLCGAASAVLGALLLRRQLRPLDYM 180
           VSRGW+QAARVEV+SHPMFA+AKLWQSALGSLGWLL+CGA SAVLGALLLRRQL+PLDYM
Sbjct: 121 VSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLICGAVSAVLGALLLRRQLKPLDYM 180

Query: 181 VEQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFTEQAERSERLRAESYQDS 240
           V+QSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALF EQAERSE+LRAESYQD+
Sbjct: 181 VKQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRAESYQDN 240

Query: 241 LTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQL 300
           LTGL+NRRYFEMQLN RVSN E A +GYLLLLRV+ LAGLN RLGGQRTD+LL+AVGEQL
Sbjct: 241 LTGLANRRYFEMQLNARVSNAEQASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQL 300

Query: 301 RRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEATLQSLHETGASDIDPVA 360
            R CA YPET +L++R RGGEFAVLAPG+V EEA+ LA  L++ L SLH TGA+D+  VA
Sbjct: 301 SRECAKYPETQNLVTRIRGGEFAVLAPGLVREEALQLASNLDSALASLHATGATDVASVA 360

Query: 361 CIGLAPFSPGDSPQALLKLADEALARAENQPTPGWVCLEQGVAAVAADSQHAWHERLDQA 420
            IGLAPF+ GDSPQA++ LAD+ALA+AE+Q  P W CL+   +A   D  HAWH  LDQA
Sbjct: 361 SIGLAPFAHGDSPQAVIGLADQALAQAESQGEPSWACLDHSASARVGDDHHAWHTLLDQA 420

Query: 421 FINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVL 480
                FEL+FQPV+    +Q VLH+KV+SRL D Q + +PAGRFLPWLERFGW  RLD L
Sbjct: 421 LDQQRFELYFQPVVASHDTQVVLHYKVLSRLLDEQDQTIPAGRFLPWLERFGWTARLDRL 480

Query: 481 VLEKVLAHLRGHDQVLALNLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQLPEQ 540
           +LE VL  +  H++ LALNLS+ATLADP+AL +VFE+L Q++ LG RL  EIGEEQLPEQ
Sbjct: 481 MLELVLEQMAEHEESLALNLSSATLADPQALNKVFEILRQHSNLGERLTLEIGEEQLPEQ 540

Query: 541 AALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFI 600
           A LEQLTRRL  LGF L+LQRFGGRFSMIGNLA LGLAYLKIDGSYIR ID E  KRLFI
Sbjct: 541 AVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFI 600

Query: 601 EAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQLVGEPAPWR 648
           EAIQRAAHSIDLPLIAERVETEGE  V+ EMG+ G+QGQL GEP PW+
Sbjct: 601 EAIQRAAHSIDLPLIAERVETEGELAVIREMGLYGVQGQLFGEPKPWQ 648