Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 688 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  123 bits (308), Expect = 3e-32
 Identities = 122/426 (28%), Positives = 188/426 (44%), Gaps = 19/426 (4%)

Query: 230 ERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDA-RAGYLLLLRVQGLAGLNARLGGQR 288
           ++LR  S QD +TGL NR  F   ++  V    +A +   L  +R+   A L A +G   
Sbjct: 260 QKLREISSQDPVTGLLNRNSFLEVMDAAVERAVNAGQTASLAYIRIDRFAALQAEIGLTD 319

Query: 289 TDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAV-HLAQALEATLQS 347
           +DQLL  +   LR     +P    L +R     F VL PG++ + A   L + L      
Sbjct: 320 SDQLLNQLAILLR---GHFPAETQL-ARFADDVFTVLQPGVIPQLAEPELRKLLSKVEGH 375

Query: 348 LHETGASDIDPVACIGLAPFSPGDSPQALLKLADEALARAENQPTPGWVC--LEQGVAAV 405
           L + G   +     IG+A     D   A  + A E   R  ++ + G      +      
Sbjct: 376 LLDVGGRTVQTTLSIGVAGL---DEKTAKAQDAIERAHRCADELSDGNALKIYDPADELA 432

Query: 406 AADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGRFL 465
           AA ++      L QA  N  F L FQP+I         H++V+ RL D QG  +P   FL
Sbjct: 433 AAANRGDIAAMLRQALENNSFRLLFQPIISLRGDS-FEHYEVLLRLLDPQGAEVPPNEFL 491

Query: 466 PWLERFGWMPRLD---VLVLEKVLAHLR--GHDQVLALNLSAATLADPKALQRVFELLGQ 520
                 G   ++D   +L   K+LA  R  GH   L L+L AA+L DP  L  +  +L  
Sbjct: 492 STAADVGLSAKIDRWVILNSIKLLAEHRAKGHRTRLFLHLCAASLQDPSLLPWLGVVLKA 551

Query: 521 NAALGPRLVFEIGE-EQLPEQAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAY 579
           +   G  LVFE GE + +      + L + L GLG  + L +FG   +    L HL   +
Sbjct: 552 SRLPGDSLVFEFGEADAVAYLKPAKALAQGLRGLGCHIGLAQFGCVLNPFNTLKHLDAGF 611

Query: 580 LKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQ 639
           +K+DGSY +++  ++++   ++ +    H      I   VE+      L + GV  IQG 
Sbjct: 612 IKVDGSYTQDLTRQENQEA-LKTLLADLHEQQKQSIVPFVESATVLATLWQAGVSYIQGH 670

Query: 640 LVGEPA 645
            +  P+
Sbjct: 671 YLQGPS 676