Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 760 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Xanthomonas campestris pv. campestris strain 8004

 Score =  136 bits (343), Expect = 3e-36
 Identities = 116/449 (25%), Positives = 201/449 (44%), Gaps = 22/449 (4%)

Query: 211 MNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDA-RAGYL 269
           +  + ++L  L  E+ +  +R+   ++ D+LTGL NR  F  +    +++ E A     L
Sbjct: 309 LTDLCQQLCTLALEREQIRQRVHQLAFYDALTGLPNRIMFSARAEQALTHAEYAGEPAAL 368

Query: 270 LLLRVQGLAGLNARLGGQRTDQLLQ----AVGEQLRRTCASYPETNDLISRSRGGEFAVL 325
           + + +     +N   G    D LL+     +GEQL  T         +++R  G EFA+ 
Sbjct: 369 MFINIDRFKLINDSQGHAAGDGLLRDIALRIGEQLTATA--------MLARLAGDEFALA 420

Query: 326 APGMVHEEAVHLAQALEATLQSLHETGASDIDPVACIGLAPF-SPGDSPQALLKLADEAL 384
            P    E+A   A+ L  T+      G   + P A +G+A F   G     LL+ AD A+
Sbjct: 421 LPQCSAEQASATAERLLGTIAGPLPVGHMTVHPSASVGVAMFPEDGRDINILLRHADLAM 480

Query: 385 ARAENQPTPGWVCLEQGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLH 444
            RA+ +    +      +  +A + + A    L QA      +L +QP +   +   +  
Sbjct: 481 NRAKKEGGGRFRFFSADMNRMAQE-RVALEAELRQAIGRNQLQLHYQPQLLSQAPHALYG 539

Query: 445 HKVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGHDQV------LAL 498
            + + R    Q  A+   RFLP  E  G MP+L+  VL +    +    Q       +++
Sbjct: 540 VEALLRWNHPQLGAVSPARFLPVAEEQGMMPQLNDWVLRRACEQVADWRQRGVPVARVSV 599

Query: 499 NLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEE-QLPEQAALEQLTRRLHGLGFGL 557
           NLSA++   P+ L  +  L+         L  E+ E   L  Q  + +    +   G  L
Sbjct: 600 NLSASSFESPRMLTDLLRLIDDMGVQPSDLTLEMTESVMLSGQPGVLENLHAIREAGISL 659

Query: 558 ALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAE 617
           +L  FG  +S + +L  L +  LK+D S++R+I+H +  R    ++ R    +   ++AE
Sbjct: 660 SLDDFGTGYSSLSHLHRLPIDELKLDMSFVRDIEHSEDARALTTSVLRIGEHLRKHVVAE 719

Query: 618 RVETEGERLVLLEMGVGGIQGQLVGEPAP 646
            VE E +RL+L ++G   +QG L   P P
Sbjct: 720 GVENEAQRLLLADLGCEVLQGYLFSRPLP 748