Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 5e-33
 Identities = 116/469 (24%), Positives = 215/469 (45%), Gaps = 29/469 (6%)

Query: 194 SLPELPRTPELRRVVQ--AMNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFE 251
           SL +  R+P   R+     ++++    ++++  +     +L   +Y DSLTGL+NR    
Sbjct: 198 SLNDTQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLL 257

Query: 252 MQLNNRVSNLEDARA-GYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQLRRTCASYPET 310
            +L++ +   +++ + G L  L +     +N  LG    DQL++AV  ++     ++ + 
Sbjct: 258 QKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRME----AWTKN 313

Query: 311 NDLISRSRGGEFAVLAPGMVHEEAVHLAQALEATLQSLHETGASDIDPVACIGLAPF-SP 369
           + L +R  G EFAVL P +   +A  +A+ L   + + +            IG++ F S 
Sbjct: 314 DYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSV 373

Query: 370 GDSPQALLKLADEALARAENQPTPGWVCLEQGVAAVAA---DSQHAWHERLDQAFINGHF 426
           G     +L+ AD AL RA+      ++  E  + A      + +   HE L+Q       
Sbjct: 374 GSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQR----QL 429

Query: 427 ELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVL 486
           ELF+QP ++      ++  + + R    +   LP G F+P  E  G +  +   ++E+  
Sbjct: 430 ELFYQPQVD--EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQAC 487

Query: 487 AH---------LRGHDQVLALNLSAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQL 537
                      L  H + LA+N+S    A    +++V   L Q    G  +  EI E  L
Sbjct: 488 YQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLL 547

Query: 538 PE--QAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQH 595
            E  ++A+E++ + L      +++  FG  +S +  L HL +  LKID S++  +  + +
Sbjct: 548 LENVESAIEKMAK-LKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDN 606

Query: 596 KRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQLVGEP 644
            +  ++ I   A  ++L +IAE VE   E   L ++G    QG L  +P
Sbjct: 607 DQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKP 655