Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 3e-29
 Identities = 118/448 (26%), Positives = 190/448 (42%), Gaps = 41/448 (9%)

Query: 223 TEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDA-RAGYLLLLRVQGLAGLN 281
           TE  + +++L  ++  D LT   NR  FE++L   +   +   R   +L L +  L  LN
Sbjct: 325 TETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVLN 384

Query: 282 ARLGGQRTDQLLQAVGEQLRRTCASYPET----NDLISRSRGGEFAVLAPGMVHEEAVHL 337
              G    D  +Q         CAS  E        ++R  G EF+VL       +AV +
Sbjct: 385 DTAGHDAGDGAIQF--------CASMLEDVLPFKATLARMGGDEFSVLLRDCTERDAVLV 436

Query: 338 AQALEATLQSLHETGASDIDPVAC-IGLAPFS-PGDSPQALLKLADEALARAENQPTPGW 395
           AQ++   L  +          + C IG+        SPQ +   AD A   A+ +    +
Sbjct: 437 AQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRF 496

Query: 396 VCLEQGVA-----AVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISR 450
               Q         +  +S +  H+    A  N   ELF Q ++       +LH +V+ R
Sbjct: 497 NLYRQDDEDLRRRQLEMESVNLVHD----ALANERIELFAQRIVPLNQPDVLLHFEVLVR 552

Query: 451 LRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGHDQVL------ALNLSAAT 504
           +++  GE +  G F+P  ER+    RLD  ++E+    L    QVL      ++NLS  +
Sbjct: 553 IKNAAGEYVSPGIFVPASERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNS 612

Query: 505 LADPKALQRVFELLGQNAALGPRLVFEIGEEQLPEQAALEQLTR------RLHGLGFGLA 558
           + +P  +  + E L  +     ++ FEI      E AA+  L +      +L  LG  LA
Sbjct: 613 IGNPDFVAFLLERLRDSRIPCSKVCFEI-----TETAAMRNLNQAIKVLSQLKSLGCVLA 667

Query: 559 LQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAER 618
           L  FG   S  G L  L +  +KIDG ++ ++D  +  RL + +I      +    +AE 
Sbjct: 668 LDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEF 727

Query: 619 VETEGERLVLLEMGVGGIQGQLVGEPAP 646
           VE +     L ++GV   QG L   P P
Sbjct: 728 VENQQILEALQQIGVDYAQGYLFSRPQP 755