Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  156 bits (394), Expect = 4e-42
 Identities = 140/442 (31%), Positives = 206/442 (46%), Gaps = 29/442 (6%)

Query: 223 TEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQ--GLAGL 280
           T++    +RL   + +D LTGL NRR F   L   V+      A  + ++ +       +
Sbjct: 363 TDRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDRFKYV 422

Query: 281 NARLGGQRTDQLLQAVGE----QLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVH 336
           N  LG Q  D LL+ V E    +LR T        DL++R  G EFAVL  G+  E A+H
Sbjct: 423 NDSLGHQAGDCLLKEVAEVLFGRLRET--------DLLARLGGDEFAVLLHGVNREGALH 474

Query: 337 LAQALEATLQSLHETGASDIDPVAC-IGLAPFSPG-DSPQALLKLADEALARAENQPTPG 394
           +A+AL   L     +       + C +G+A ++   D P+ LL  AD A+  A+      
Sbjct: 475 VAEALRLCLADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNR 534

Query: 395 WVCLEQGV----AAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISR 450
               E+G     A V AD+ ++  + +D+   N  F   FQP+I+  S   V+ H+ ++R
Sbjct: 535 VHLFEEGDLEVRARVVADAGYS--KLIDRGLRNNLFRPVFQPIIDVTSGA-VVGHETLAR 591

Query: 451 LRDGQGEALPAGRFLPWLERFGWMPRLD---VLVLEKVLAHLRG--HDQVLALNLSAATL 505
           L D     L     +P  ERFG    +D   +L + + LA   G      L+ NLSA ++
Sbjct: 592 LHDPAAIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQSV 651

Query: 506 ADPKALQRVFELLGQNAALGPRLVFEIGEEQ-LPEQAALEQLTRRLHGLGFGLALQRFGG 564
            D +    V  L+         L+FEI E   +   AA     + L  LG   AL  FG 
Sbjct: 652 GDGRIFSAVRRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALDDFGS 711

Query: 565 RFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGE 624
            +S    L  L + +LKIDG Y+R+I H+  K   ++AI   AH++ +  IAE VE    
Sbjct: 712 GYSSFTYLRELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVEEASG 771

Query: 625 RLVLLEMGVGGIQGQLVGEPAP 646
             VL + GV   QG L G PAP
Sbjct: 772 LEVLRQSGVDCAQGFLFGRPAP 793