Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  120 bits (301), Expect = 3e-31
 Identities = 120/440 (27%), Positives = 194/440 (44%), Gaps = 27/440 (6%)

Query: 223 TEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGY-LLLLRVQGLAGLN 281
           T + +  ER+R  S  D+LT L NR  F  +L   V        G  ++ + +   + +N
Sbjct: 431 TARKKAEERIRYLSNYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVN 490

Query: 282 ARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVH-EEAVHLAQA 340
             LG    D LL  +  ++        E  D ++R  G EFA++   +   + A  LA+ 
Sbjct: 491 DTLGHAAGDHLLMTIASRINAAA----EEADTVARVGGDEFALIQTALTSADSAASLARR 546

Query: 341 LEATLQSLHETGASDIDPVACIGLAPF-SPGDSPQALLKLADEALARAENQPTPGWVCLE 399
           L   +++  + G  ++   A +G+A +   G  P  L+K AD A+ RA            
Sbjct: 547 LIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSGDDSCCFFS 606

Query: 400 QGVAAVAADSQHAWHERLDQAFING-----HFELFFQPVIECASSQRVLHHKVISRLRDG 454
             + A AA  + +  E L +A  +G     H++L F     C  S R +  + ++R    
Sbjct: 607 NEMNAEAA-VRLSLEEDLRRALDSGDQLFLHYQLQF-----CIESGRPVGAEALARWTHP 660

Query: 455 QGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGHDQV------LALNLSAATLADP 508
              A+P  RF+P  E  G +  L   VL   LA              +A+N+SA      
Sbjct: 661 TLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQK 720

Query: 509 KALQRVFELLGQNAALGPRLVFEIGEEQLPEQA--ALEQLTRRLHGLGFGLALQRFGGRF 566
             ++RV +LL Q+      L  E+ E  L + A  A+ QLT  L   G  L++  FG  +
Sbjct: 721 GLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQLTA-LSQAGIRLSIDDFGTGY 779

Query: 567 SMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERL 626
           S +G L    +  LK+D S++R++  + +  +   AI    HS+ L +IAE VET  +  
Sbjct: 780 SSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMA 839

Query: 627 VLLEMGVGGIQGQLVGEPAP 646
            L   G   +QG L+  P P
Sbjct: 840 YLRREGCDVVQGYLMAYPEP 859