Pairwise Alignments
Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440
Subject, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4
Score = 124 bits (311), Expect = 1e-32
Identities = 125/434 (28%), Positives = 201/434 (46%), Gaps = 21/434 (4%)
Query: 224 EQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNAR 283
E + SE D LTGL NR YFE L + + + R+ ++ + + +N
Sbjct: 286 EPVQESEAHSVSLNFDPLTGLPNRAYFEA-LYDLANPCQCERSTFVGFINLDRFQVVNNV 344
Query: 284 LGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEA 343
G + DQLL QL + D+I+R G EF +L P + + A +A+ +
Sbjct: 345 SGHRAGDQLLC----QLAARLSQLVRKEDVIARLSGDEFGILMPNIDVQIAEQVAERICQ 400
Query: 344 TLQSLHE---TGASDIDPVACIGLAPF-SPGDSPQALLKLADEALARAENQPTPGWVCLE 399
+ + HE G S V+ +GLA S DS LL+ A A A+ + W
Sbjct: 401 AMAN-HEFSWEGRSHSVSVS-MGLARCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYS 458
Query: 400 -QGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEA 458
Q +++ + + A N FELF+QP+ +S LH +++ R+R +GE
Sbjct: 459 TQDPVVEKLNTEMSASVDIVGALANDRFELFYQPIEPLYASDDGLHLEILLRMRSTEGEL 518
Query: 459 LPAGRFLPWLERFGWMPRLDVLVLEKVL------AHLRGHDQVLALNLSAATLADPKALQ 512
+P G FLP ERF +LD V++K+L L ++++NLSA +++D + +
Sbjct: 519 IPPGIFLPAAERFNLAAKLDRWVIDKLLRWGSENLALWQSLSMVSVNLSALSISDSEFIN 578
Query: 513 RV-FELLGQNAALGPRLVFEIGEEQLPEQA-ALEQLTRRLHGLGFGLALQRFGGRFSMIG 570
+ LLG+ L +L FEI E Q L + LG LAL FG FS
Sbjct: 579 WLEMRLLGE-PELVSKLCFEITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFA 637
Query: 571 NLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLE 630
L L + Y+KIDG +I+++ ++ + + AI + + ++AE VE+ L +
Sbjct: 638 YLKLLDVDYVKIDGQFIQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQK 697
Query: 631 MGVGGIQGQLVGEP 644
+GV QG + P
Sbjct: 698 LGVEFGQGYGIARP 711