Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (311), Expect = 1e-32
 Identities = 125/434 (28%), Positives = 201/434 (46%), Gaps = 21/434 (4%)

Query: 224 EQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNAR 283
           E  + SE        D LTGL NR YFE  L +  +  +  R+ ++  + +     +N  
Sbjct: 286 EPVQESEAHSVSLNFDPLTGLPNRAYFEA-LYDLANPCQCERSTFVGFINLDRFQVVNNV 344

Query: 284 LGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEA 343
            G +  DQLL     QL    +      D+I+R  G EF +L P +  + A  +A+ +  
Sbjct: 345 SGHRAGDQLLC----QLAARLSQLVRKEDVIARLSGDEFGILMPNIDVQIAEQVAERICQ 400

Query: 344 TLQSLHE---TGASDIDPVACIGLAPF-SPGDSPQALLKLADEALARAENQPTPGWVCLE 399
            + + HE    G S    V+ +GLA   S  DS   LL+ A  A   A+ +    W    
Sbjct: 401 AMAN-HEFSWEGRSHSVSVS-MGLARCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYS 458

Query: 400 -QGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEA 458
            Q       +++ +    +  A  N  FELF+QP+    +S   LH +++ R+R  +GE 
Sbjct: 459 TQDPVVEKLNTEMSASVDIVGALANDRFELFYQPIEPLYASDDGLHLEILLRMRSTEGEL 518

Query: 459 LPAGRFLPWLERFGWMPRLDVLVLEKVL------AHLRGHDQVLALNLSAATLADPKALQ 512
           +P G FLP  ERF    +LD  V++K+L        L     ++++NLSA +++D + + 
Sbjct: 519 IPPGIFLPAAERFNLAAKLDRWVIDKLLRWGSENLALWQSLSMVSVNLSALSISDSEFIN 578

Query: 513 RV-FELLGQNAALGPRLVFEIGEEQLPEQA-ALEQLTRRLHGLGFGLALQRFGGRFSMIG 570
            +   LLG+   L  +L FEI E     Q      L   +  LG  LAL  FG  FS   
Sbjct: 579 WLEMRLLGE-PELVSKLCFEITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFA 637

Query: 571 NLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLE 630
            L  L + Y+KIDG +I+++  ++  +  + AI +    +   ++AE VE+      L +
Sbjct: 638 YLKLLDVDYVKIDGQFIQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQK 697

Query: 631 MGVGGIQGQLVGEP 644
           +GV   QG  +  P
Sbjct: 698 LGVEFGQGYGIARP 711