Pairwise Alignments

Query, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  129 bits (324), Expect = 6e-34
 Identities = 122/447 (27%), Positives = 199/447 (44%), Gaps = 30/447 (6%)

Query: 220 ALFTEQAERS---ERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAG-----YLLL 271
           A+F++ ++R    ERL+  +  D LTGL NR    ++L   V +  +  AG      LLL
Sbjct: 505 AVFSDISDRKALEERLQFLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLL 564

Query: 272 LRVQGLAGLNARLGGQRTDQLLQAVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVH 331
           L +     +N  LG    DQLL+ V ++L+         +  + R  G EF ++ P    
Sbjct: 565 LDLDHFKTINDSLGHHAGDQLLRTVVKRLKNILRE----SSTLCRQGGDEFLIVLPQA-- 618

Query: 332 EEAVHLAQALEATLQSLHETGASDIDPVACIG-----LAPFSPGDSPQALLKLADEALAR 386
           ++   +++A E  L +L      D  P++  G     LAP   G     LLK AD AL  
Sbjct: 619 QDLARVSRAAETVLAALATPFEVDGHPLSITGSIGISLAP-DDGSDFDTLLKKADTALVH 677

Query: 387 AENQPTPGWVCLEQGVAAVAADSQHAWHERLDQAFINGHFELFFQPVIECASSQRVLHHK 446
           A+      +    + +  V+   +    +RL QA       L++QP ++ AS  RV+  +
Sbjct: 678 AKQSGRNAYRFFTEAMN-VSTLERLTLQQRLHQALERQELVLYYQPQLDLASG-RVVGVE 735

Query: 447 VISRLRDGQGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGH------DQVLALNL 500
            + R R  +G  +P G+F+P  E  G +  +   V+++     R           +A+NL
Sbjct: 736 ALLRWRTPEG-LVPPGKFIPLAEETGLIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNL 794

Query: 501 SAATLADPKALQRVFELLGQNAALGPRLVFEIGEEQLPEQAALEQLT-RRLHGLGFGLAL 559
           SA        L  V + L   +     L  E+ E  L + A     T + ++ +G  L++
Sbjct: 795 SALQFHRDNLLITVGDALSAASLPAASLELELTESILIQDAEATLATLKAMNAMGVLLSI 854

Query: 560 QRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFIEAIQRAAHSIDLPLIAERV 619
             FG  +S +  L    +  LKID S++R+I  +      + A+ + A S+ L  IAE V
Sbjct: 855 DDFGTGYSSLAYLKRFTVDKLKIDQSFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGV 914

Query: 620 ETEGERLVLLEMGVGGIQGQLVGEPAP 646
           ETE +   L   G   +QG L   P P
Sbjct: 915 ETESQAAALRATGCDEVQGYLYARPMP 941