Pairwise Alignments

Query, 229 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 11  LASEQLPPHQARAVIEERLRSAILDGRLPPGTAVRQQELATLYGVSRMPVREALRQLEAQ 70
           LASE+     A  ++ + ++++I+ G LP G+ + +Q LA  YG+SR P REAL+ LE Q
Sbjct: 7   LASEKSSTTLADQILVQ-IQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQ 65

Query: 71  SLLKVEMHKGAVVAPLIGEDAVDTYALRVLLESEALRQSIPLLDASDIASARGYIQQLE- 129
            L+    H GA VA L   +  D Y LR +LE  A   +   +    +A     +   E 
Sbjct: 66  RLVVRAPHVGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQET 125

Query: 130 ----NETSHTEIGRLNRLLHMALYSKAPNKKLLRLIENELNEEERFLRFHLSSMGLGKLT 185
                +T   E G ++   H  +   + NK L   +   L    R  R+  ++       
Sbjct: 126 ALANGDTYFQEEGDVD--FHYQIIQASGNKHLQETLIGGLYHLLRMYRYQCTNKNRPVKA 183

Query: 186 QDDHNALVDAASDKLVDEAVAVLERHLNGGAR 217
             +H  +V+A + +  + A  ++ RH+  G +
Sbjct: 184 IAEHRRIVEAIAQRDGELASLLMRRHIEQGRK 215