Pairwise Alignments

Query, 273 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 278 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (308), Expect = 5e-33
 Identities = 72/236 (30%), Positives = 136/236 (57%), Gaps = 2/236 (0%)

Query: 26  VQDARLEGALQTALSLNRMLDSFRIKVEVDGKQARLSGEVENEVERQLAEDVARATRGIE 85
           + D R E  + T+ +L+  L +  +KV V   +A L+G+V+ ++ ++LA ++A    GI+
Sbjct: 37  MDDVRQESQIATSYALSPYLRANDLKVTVQKGKAVLTGKVDEKISKELAGEIALGVSGIK 96

Query: 86  QVENLLQLNAQLVERPQELRAYAQRLEDVTLAAVIRARLLWSRTTEKAPIEVQSSEGVVT 145
            V+N + ++A  + +     ++  + +D  + A IR++L W++  +    EV +  G VT
Sbjct: 97  DVDNKIVVDANYIPKANS-NSFGDKFDDTNITAAIRSKLQWNKDVDDVVTEVITKSGRVT 155

Query: 146 LRGKVDSAEAKELAGVVARTTDGVYLVNNLVSLDTAAMAKA-RETPAGAPIGPQPSDSWI 204
           L G  ++  AK +   +A  T GV  V N + ++++A+ K  +E           SDSWI
Sbjct: 156 LNGIAENQNAKNVIHRLALNTRGVKSVTNNLKVESSAINKEEKEKRKNETEIHNISDSWI 215

Query: 205 IDKIQSSYRFSRNLDGLNLKVASEAGMVRLSGEVVSAEQKTIAVEIARQIIGVRGV 260
             KI+SS+ +S N++G ++ V++  G+V L+G+V S  ++++AVE A+ I GV+ V
Sbjct: 216 TAKIKSSFMYSNNINGSDIDVSTNNGVVILTGKVNSGIEQSLAVETAQNIRGVKSV 271



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 21  AFADPVQDARLEGALQTALSLNRMLDSFRIKVEVDGKQARLSGEVENEVERQLAEDVARA 80
           +F D   D  +  A+++ L  N+ +D    +V     +  L+G  EN+  + +   +A  
Sbjct: 116 SFGDKFDDTNITAAIRSKLQWNKDVDDVVTEVITKSGRVTLNGIAENQNAKNVIHRLALN 175

Query: 81  TRGIEQVENLLQLNAQLVERPQELR----AYAQRLEDVTLAAVIRARLLWSRTTEKAPIE 136
           TRG++ V N L++ +  + + ++ +         + D  + A I++  ++S     + I+
Sbjct: 176 TRGVKSVTNNLKVESSAINKEEKEKRKNETEIHNISDSWITAKIKSSFMYSNNINGSDID 235

Query: 137 VQSSEGVVTLRGKVDSAEAKELAGVVARTTDGV 169
           V ++ GVV L GKV+S   + LA   A+   GV
Sbjct: 236 VSTNNGVVILTGKVNSGIEQSLAVETAQNIRGV 268



 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 90  LLQLNA-QLVERPQELRAYAQRLEDVTLAAVIRARLLWSRTTEKAPIEVQSSEGVVTLRG 148
           LL L+A Q V          + ++DV   + I      S       ++V   +G   L G
Sbjct: 15  LLILSALQPVSAADTAATATKAMDDVRQESQIATSYALSPYLRANDLKVTVQKGKAVLTG 74

Query: 149 KVDSAEAKELAGVVARTTDGVYLVNNLVSLDTAAMAKARETPAGAPIGPQPSDSWIIDKI 208
           KVD   +KELAG +A    G+  V+N + +D   + KA         G +  D+ I   I
Sbjct: 75  KVDEKISKELAGEIALGVSGIKDVDNKIVVDANYIPKANSNS----FGDKFDDTNITAAI 130

Query: 209 QSSYRFSRNLDGLNLKVASEAGMVRLSGEVVSAEQKTIAVEIARQIIGVRGVDADL 264
           +S  ++++++D +  +V +++G V L+G   +   K +   +A    GV+ V  +L
Sbjct: 131 RSKLQWNKDVDDVVTEVITKSGRVTLNGIAENQNAKNVIHRLALNTRGVKSVTNNL 186