Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  288 bits (736), Expect = 3e-82
 Identities = 176/461 (38%), Positives = 259/461 (56%), Gaps = 27/461 (5%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           IL+V+DE+ I    R  LE   Y V+ A S  +A+       FDL   DLRL    G ++
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           +      A    V+I+T+++++ +AVD+++ GA DY+ KP   D++    A+ L   Q S
Sbjct: 64  IKL----AEGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119

Query: 131 ARLEALEGEIR--------KPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKG 182
           A ++A              +   G+  H   M  +    R+VA TD+N+LI GESGTGK 
Sbjct: 120 AAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESGTGKE 179

Query: 183 ELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGT 242
            +ARA+H  S+RA+   +++NC ++   L+ESELFGH +GAFTGAS    G V  ADGGT
Sbjct: 180 LVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGT 239

Query: 243 LFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFRE 302
           LFLDEIG+ PL  Q +LLR +Q+ E  RVG   +++ DVR++AAT+ +L+ + +  +FRE
Sbjct: 240 LFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTGQFRE 299

Query: 303 DLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPG 362
           DL YRL+VI L LPPLRER  D+L +A  FLAR  +        FS +A  A+ +Y WPG
Sbjct: 300 DLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSRDAEQAIRHYSWPG 359

Query: 363 NIRELRNVVERASIICPQERVEISHLGMG----------EQPAGSAPRVGAALSLDE--- 409
           N+REL N +ERA+I+     ++   LG+           ++P GS   +  +    E   
Sbjct: 360 NVRELENAIERAAILSESPEIDAELLGIDIELDELDDDFDEPLGSIRGIANSNEPTEDLS 419

Query: 410 LERAHIGAVLAASD--TLDQAAKTLGIDASTLYRKRKQYNL 448
           LE      VL   D  T  + A+ LGI    L+ +R++  +
Sbjct: 420 LEDYFQHFVLEHQDHMTETELARKLGISRKCLWERRQRLGI 460