Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 442 a.a., sigma-54 dependent transcriptional regulator from Parabacteroides merdae CL09T00C40

 Score =  278 bits (712), Expect = 2e-79
 Identities = 160/442 (36%), Positives = 253/442 (57%), Gaps = 3/442 (0%)

Query: 9   GRILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGL 68
           G++L++DDE  IL      +  EGY V  A +       L++   ++   D+ L + +G+
Sbjct: 2   GKVLIIDDEKQILSLLSRIIGLEGYEVFQATNCKVGIKQLEQNDPEVVLCDVCLPDGSGV 61

Query: 69  DVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQ 128
           +++++++   P   V+++TAH  I   V AI+ GA DY+ K    +++    AK +E   
Sbjct: 62  ELVSELKRLRPLSEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKILPLIAKAMEKAT 121

Query: 129 LSARLEALEGEIRKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARAI 188
           ++   +   G+ +     +   SPA+   +  AR+VA TD  +L+ GE+GTGK   A++I
Sbjct: 122 VAYSQQKAVGK-QYSFATVIGRSPAIEEAVSLARKVAATDVPVLLTGETGTGKEVFAQSI 180

Query: 189 HGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDEI 248
           H  S R+ KA V INC S + +L+ESE+FGH  GAFTGA + T G   +AD GT+FLDEI
Sbjct: 181 HQHSSRSDKAFVAINCSSFSRDLLESEMFGHKAGAFTGALKETKGLFEEADNGTIFLDEI 240

Query: 249 GDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYRL 308
           G+    LQ KLLR ++  E+ ++GD    + +VR++AATN +L + + +  FREDL YRL
Sbjct: 241 GEMAFDLQAKLLRILETGEFLKIGDTKPVKVNVRVIAATNRDLAKEIADGHFREDLFYRL 300

Query: 309 NVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRELR 368
           +V  +HLPPLRER +DI +  + F++    +  +  R  S +    L  Y W GN+RELR
Sbjct: 301 SVFHIHLPPLRERVDDIPLHVEAFVSALSSKIGKTIRTISPDYVRILKRYPWKGNVRELR 360

Query: 369 NVVERASIICPQERVEISHLGMG-EQPAGSAPRVGAALSLDELERAHIGAVLA-ASDTLD 426
           NVVER+ II   + +    L +  + P  +     +   LD +E+ HI  VL   +    
Sbjct: 361 NVVERSLIISDGDTLTADTLPLTIQNPQDNTDSSYSGFDLDGVEKMHIQKVLKYTNGNKT 420

Query: 427 QAAKTLGIDASTLYRKRKQYNL 448
           + ++ LGI  +TLYRK ++Y L
Sbjct: 421 ETSRLLGIGLTTLYRKIEEYGL 442