Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 454 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  308 bits (790), Expect = 2e-88
 Identities = 182/451 (40%), Positives = 258/451 (57%), Gaps = 17/451 (3%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           ILLV+DE ++    ++ L   GY VA A++A  A   L R+ FDL   DLRL   +G+++
Sbjct: 6   ILLVEDELSMRLGMQHALSRAGYEVAAADTAEAARHALHRRPFDLVITDLRLPGMSGMEL 65

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           L  +R   P   V+++TA   ++ AV AI+AGA D+L KP   D L +A  +      L 
Sbjct: 66  LDSIREMHPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFQSDGLLIAVERFFRFLDLK 125

Query: 131 ARLEALEGEIRKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARAIHG 190
              + L GE  + +      SPAM+ V +  R +A     +L+LG SG+GK  +A A+H 
Sbjct: 126 RENDRLRGE--REEGEFIGESPAMLKVFDRIRALADACVPVLVLGPSGSGKELVAGALHR 183

Query: 191 WSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDEIGD 250
            SKR  +  + INC +L  +L+ESELFGH +GAFTGA ++ +G+   ADGGTLF DE+G+
Sbjct: 184 RSKRRDRPFIKINCAALPEQLLESELFGHEKGAFTGAQQARIGKFEAADGGTLFFDEVGE 243

Query: 251 FPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYRLNV 310
            PL LQ KLLR ++D+E   VG    R+ +VR + AT  NLEE + + RFREDL YR+NV
Sbjct: 244 MPLPLQAKLLRVLEDQEVTPVGGNTPRKVNVRTVFATARNLEEAIADGRFREDLYYRINV 303

Query: 311 ITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRELRNV 370
           + + LPPLRER  D+ +L +RFL RF   + R A   S++AR ALL Y +PGN+RELRN 
Sbjct: 304 VPVTLPPLRERGSDVALLTERFLRRFCALHERQAT-LSEQARLALLAYDYPGNVRELRNA 362

Query: 371 VERASIICPQERVEISHL------------GMGEQPAGSAPRVGAALSLDELERAHIGAV 418
           VE A ++C +  + + HL               +  AG  P    A  +   ER  I   
Sbjct: 363 VEHAVLLCTEGEIHVGHLPERIRAATQSMPPACDDDAGDTP-ASLAEGVARFERRRIMEA 421

Query: 419 LAASDTLD-QAAKTLGIDASTLYRKRKQYNL 448
           L  +     QAA  LGI    L+ K K+ ++
Sbjct: 422 LERTGGRKIQAADLLGISRKQLWLKLKELSI 452