Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  325 bits (832), Expect = 2e-93
 Identities = 196/455 (43%), Positives = 270/455 (59%), Gaps = 19/455 (4%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           +L+VDD+ A     R  L   GY+   A+    A   ++ +  D   +D+R+    G++ 
Sbjct: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           L ++    P + V+I+TA+S+++TAV+A++ GA DYL KP   D LR    + L+  +L 
Sbjct: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125

Query: 131 ARLEALEGEI----RKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELAR 186
           +    L+  +    R P  G+   S  M  + E    VA ++A +LI GESGTGK  +AR
Sbjct: 126 SENRELKSRLDDAARAP--GIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVAR 183

Query: 187 AIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLD 246
           ++H  S+R+ K  VT+NC +L+  L+ESELFGH RGAFTGA +   GR  QADGGTLFLD
Sbjct: 184 SLHEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFLD 243

Query: 247 EIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLY 306
           EIG+ PL LQ KLLR +Q  E +RVG  V    DVR+LAATN +L E V   RFREDL Y
Sbjct: 244 EIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFY 303

Query: 307 RLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRE 366
           RLNVI +H+P LRER +DI +LA  FL R+ +   +  +GF+ +A   LL + WPGN+RE
Sbjct: 304 RLNVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRE 363

Query: 367 LRNVVERASIICPQERVEISHLGMGEQPAGSA-PRVG-----------AALSLDELERAH 414
           L N VERA I+   + V    L M  + AG A P V            A LSL++LER  
Sbjct: 364 LENAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAGLSLEDLERRA 423

Query: 415 IGAVL-AASDTLDQAAKTLGIDASTLYRKRKQYNL 448
           I A L    D   +AA+ LGI  +TL+ K K+Y+L
Sbjct: 424 IVATLRETGDNKSEAARRLGITRATLHNKLKKYDL 458