Pairwise Alignments

Query, 448 a.a., Alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas putida KT2440

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  289 bits (739), Expect = 1e-82
 Identities = 175/450 (38%), Positives = 254/450 (56%), Gaps = 12/450 (2%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDLRLGEDNGLDV 70
           IL++DDE   L      L D GY+V   N    A   L+    D+   D+++    G +V
Sbjct: 7   ILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFLEESEVDVVITDMKMPRVTGREV 66

Query: 71  LAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130
           L +++   P + V I+TA  +I+ AVD ++ GA DY+ KP S D+L L+     E+ ++ 
Sbjct: 67  LERVKKTWPHIPVCIMTAFGSIEGAVDVMKYGAFDYITKPFSNDELLLSVQNAAELSRVH 126

Query: 131 ARLEALEGEI--RKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTGKGELARAI 188
            +  AL   +  R     +   S A+  VL+   + A + + +LI GESGTGK  +ARAI
Sbjct: 127 RQYRALRANLEERYGTHQIIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKELVARAI 186

Query: 189 HGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADGGTLFLDEI 248
           H  S R     V++NC +LN  ++ESELFGH +G+FTGA     GR  QADGGTLFLDEI
Sbjct: 187 HFSSPRNSGPFVSVNCMALNPGVLESELFGHEKGSFTGAMAMRRGRFEQADGGTLFLDEI 246

Query: 249 GDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRFREDLLYRL 308
           G+    LQ KLLR +Q++ +ERVG       D+R++AATN +L++ V    FREDL YRL
Sbjct: 247 GELTPELQVKLLRVLQERRFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFREDLYYRL 306

Query: 309 NVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRELR 368
           NV+ + LPPLRER EDI +L   F+ +  ++     + F+ EA   L  Y WPGNIR+L+
Sbjct: 307 NVVHVALPPLRERREDIPLLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPGNIRQLQ 366

Query: 369 NVVERASIICPQERVEISHLGM----GEQPAGSA-----PRVGAALSLDELERAHIGAVL 419
           NVVER  ++   + V +  L       E    SA      R+  A +L+++E A I   L
Sbjct: 367 NVVERCLVLVASDTVGVDDLPPEIRDEESQLKSAVDLLPVRLDLADTLEKIEAALIRRAL 426

Query: 420 AASDTLD-QAAKTLGIDASTLYRKRKQYNL 448
             ++ +  +AA+ LGI  S L  K K+Y +
Sbjct: 427 VRAEFVQVKAAELLGISKSLLQYKLKKYGI 456