Pairwise Alignments

Query, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

Subject, 1364 a.a., Two-component system sensor protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  138 bits (348), Expect = 1e-36
 Identities = 118/402 (29%), Positives = 194/402 (48%), Gaps = 55/402 (13%)

Query: 238 DALRKHQ-ATNVDELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGWNDS-- 294
           +A  +HQ A    EL+      +A+L      ++  D  G +   NP A++ LG++    
Sbjct: 474 NASLEHQVAERTSELVQFSVLQRAILAHAGYAIIATDSSGFVTMFNPAAEKLLGYSADDV 533

Query: 295 ---RLGSSLVEALQRPE----LEQQ--------LRQVLRGGSLDRPPDDLNMEVDEESRL 339
              R  S  +EA +  E    L +Q        L  V    SL R        V ++ R 
Sbjct: 534 IGRRKASQFIEADELQERALRLAEQTGTPVAGTLEAVAALTSLGRSDTSEWTYVSQDGRR 593

Query: 340 LTYSLT--PVSHPQGPILGAVMVLHDVTEQRAFERV--------------RSEFVLRASH 383
           L   LT   +      ++G + V  D+TEQ+  E+               +S+F+   SH
Sbjct: 594 LPVLLTLSTLRDDNDQVIGYLGVAVDLTEQKLHEKQLRLAMDAARSANQSKSDFLANMSH 653

Query: 384 ELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEMQRLTQLINDLLNFSRYQSGLQ 443
           E+RTP+  + +    L +R + P  A+  D++  I    + L ++IND+L+FS+ ++G  
Sbjct: 654 EIRTPMNAI-LGMLYLLQRSELPGAAQ--DMVTKIDRSARSLLEIINDILDFSKIEAGRI 710

Query: 444 KLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPLPR----IQADVAQLDRVLDNL 499
            LE AP  ++ L D+         + K +E+I E   PLPR    +  D  ++++VL NL
Sbjct: 711 DLERAPFDLNQLFDNIADLMRSSLSAKPVEMIVE---PLPRECRWLLGDALRINQVLVNL 767

Query: 500 LHNAIRHTANGGRIRLHARRHAE------RVIISVEDNGEGISYGQQARIFEPFVQV--- 550
           + NAI+ T  G  + L  RR         +++ SV D G GIS  +Q+ IF PF+Q    
Sbjct: 768 VGNAIKFTEQG-EVVLSVRRFPSGDPNKIKLLFSVRDTGIGISKEKQSLIFSPFLQADTS 826

Query: 551 -GRKKGGAGLGLALCKEIVQLHGGRMGVFSRPGQGTQFYMAL 591
             R+ GG+GLGL + + +++L GG + V S PG+G++FY  +
Sbjct: 827 TSRRYGGSGLGLTISRRLIELMGGALEVESVPGRGSEFYFVI 868



 Score = 28.1 bits (61), Expect = 0.003
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 249 DELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGW-NDSRLGSSLVEALQ-- 305
           +E+L  Q  L A++    + ++     G + H NP A+   G+  D  +G  L   L   
Sbjct: 343 EEVLRKQMELAALVSHSSEAIVAETPDGEITHWNPAAEAMFGYPADVAIGQDLTTLLSPQ 402

Query: 306 ---RPELEQ 311
               P+++Q
Sbjct: 403 PYAMPQIDQ 411