Pairwise Alignments

Query, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

Subject, 778 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  123 bits (309), Expect = 2e-32
 Identities = 128/438 (29%), Positives = 197/438 (44%), Gaps = 46/438 (10%)

Query: 193 RRFGQPIEA--LAKAADQLGKGNFDVTLPVTQA-AELNQLTRRF--GLMADALRKHQATN 247
           RR+ Q  +A  + +  ++L        LPV  A +EL    RR   GL+ D   + +A  
Sbjct: 343 RRYLQTGQAGIIGRGREELALRRDGSLLPVELAISELRLDDRRIFTGLVRDISARKEADR 402

Query: 248 VDELLAGQQRL--------QAVLD-SID-DGLLIIDRQGRLEHLNPV-AQRQLGWNDSRL 296
             +L   ++R         +A++D  ID D +   DR   +  L+P    R   W     
Sbjct: 403 --QLRENEERYALAIAGTHEAIVDWDIDSDTITYSDRITAIVGLDPKDLDRSASW----- 455

Query: 297 GSSLVEALQRPELEQQLRQVLRGGSLDRPPD-DLNMEVDEESRLLTYSLTPVSHPQGPIL 355
             +L+    R +   ++  +LRG S     D  L      E R L +  T +  P G I 
Sbjct: 456 -IALIHPDHRKDYLTRMDALLRGESSFFSCDFRLAGRAGAEERWLRHRATALRRPDGQIY 514

Query: 356 GAVMVLHDVTEQRAFE--------------RVRSEFVLRASHELRTPVTGMHMAFGLLRE 401
                + D+T+ R  E              R +SEF+   SHELRTP+  +     +L  
Sbjct: 515 RLSGAVGDITDSRRGEDRLREAKEAAEFANRAKSEFLTNMSHELRTPLNAIIGFSEVLHS 574

Query: 402 RVKFPPEAREN-DLLETIGEEMQRLTQLINDLLNFSRYQSGLQKLELAPCAIDDLLDHAQ 460
            +  P  A +  D   +I +  + L  +IND+L+ SR ++G   L   P    +++    
Sbjct: 575 EMFGPLGATQYLDYAASIRDSGRHLLDVINDILDVSRIEAGRATLFPEPLDFAEIVASVH 634

Query: 461 SRFAEQAAHKQIELIKELDPPLPRIQADVAQLDRVLDNLLHNAIRHTANGGRIRLHARRH 520
               ++A    + L   LDP LP +  +  +L +VL NLL NAI+ T  GG I L AR  
Sbjct: 635 RLVNQRAEAAGVRLKITLDPALPPLLGEARRLKQVLINLLGNAIKFTPAGGEIALSARGD 694

Query: 521 AER--VIISVEDNGEGISYGQQARIFEPFVQV----GRKKGGAGLGLALCKEIVQLHGGR 574
            ++  ++I V D+G G++        EPF Q+     R+  G GLGL L K  V+LHGG 
Sbjct: 695 EDKGQMVIEVSDSGIGMAPEDIPLALEPFRQIDGQLARRYEGTGLGLPLSKAFVELHGGT 754

Query: 575 MGVFSRPGQGTQFYMALP 592
           + V S PG GT+  + LP
Sbjct: 755 LRVDSTPGAGTRITVRLP 772



 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 6/93 (6%)

Query: 232 RFGLMADALRKHQATNVDELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGW 291
           R GL+ D     +A+  +++   +QRL  ++ ++ DG+++ID  G +E  NP A+R  G+
Sbjct: 259 RVGLLTDITETRKAS--EQVRQREQRLDGIMKTVVDGIVVIDENGIIESFNPAAERLFGY 316

Query: 292 N-DSRLGSS---LVEALQRPELEQQLRQVLRGG 320
             +  +G+S   L+   +    ++ LR+ L+ G
Sbjct: 317 RAEEVVGASINRLIPGGESGRHDRSLRRYLQTG 349