Pairwise Alignments

Query, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

Subject, 733 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  149 bits (375), Expect = 5e-40
 Identities = 134/474 (28%), Positives = 210/474 (44%), Gaps = 48/474 (10%)

Query: 163 RDRALLVSGVLGLMGLVVLVLGFITAHNIARRFGQPIEALAKAADQLGKGNFDVTLPVTQ 222
           RD  ++ +  L L G +  VL    A +IA R   P+   A+   +  +    + LP  Q
Sbjct: 232 RDATVMGAAALFLAGTLWAVL---LADSIAARVSHPLRRAAEVFKERPRLGAPLHLPPPQ 288

Query: 223 AAELNQLTRRFGLMADALRKHQATNVDELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLN 282
             E+  L      +   L +  A NV  L A +++L+ +L+S DD +L++D  G + H++
Sbjct: 289 TLEVRVLFDELVRLWGRLSELDALNVGSLTAEKRKLEVILESADDAILVLDGAGTVAHVS 348

Query: 283 PVAQRQLG----------WNDSRLGSSLVEALQRPELEQQL------------------- 313
                 LG          W D    +    AL R  L+  L                   
Sbjct: 349 ERMLPLLGLAREQVLGMPWADLSTAAPNYLAL-RGALDASLHGKRDVPLTEGGEERVFVA 407

Query: 314 -RQVLRGGSLDRPPDDLN-----MEVDEESRLL-TYSLTPVSH--PQGP--ILGAVMVLH 362
            R+ L GG   R  +         E+D + R     S+   SH  P  P  ++G V +L 
Sbjct: 408 RRRDLVGGDGHRLAEVGGDGHGLPEIDRDGRARPASSIAHHSHGSPASPTSVVGQVFLLG 467

Query: 363 DVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEM 422
           DVTE R  E +RSE +   SHEL+TP+  + +A  LL +R K   +A    L+ET+ E+ 
Sbjct: 468 DVTEARRREGLRSEMMDWVSHELKTPMQSLCLAADLL-DRRKDTLDAEGRLLVETVYEDA 526

Query: 423 QRLTQLINDLLNFSRYQSGLQKLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPL 482
            RL  L    ++ +R       L      +  LLD   + F   A    + L  +     
Sbjct: 527 ARLRTLAQQFMDIARMTPSALHLTRDEADLPALLDRWLTPFVLLARETGVRLAVDAREAP 586

Query: 483 PRIQADVAQLDRVLDNLLHNAIRHTANGGRIRLHARRHAERVIISVEDNGEGISYGQQAR 542
            +++ D  +   V+ NL+ NA+R +   G +R+    H  R +I VED G G+    QAR
Sbjct: 587 VKVRLDAERFAWVVSNLVANALRASPTDGEVRVRVSEHQGRAVIEVEDEGAGLPEAVQAR 646

Query: 543 IFEPFVQ---VGRKKGGAGLGLALCKEIVQLHGGRMGVFSRPGQGTQFYMALPV 593
           +F+PF      G + G  GLGLA+ + IV  HGG +    R  +G++F + LP+
Sbjct: 647 LFQPFAHGPAAGARGGLYGLGLAITRSIVDAHGGHIAYERREERGSRFTVTLPL 700