Pairwise Alignments

Query, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

Subject, 921 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  113 bits (283), Expect = 3e-29
 Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 9/224 (4%)

Query: 371 ERVRSEFVLRASHELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEMQRLTQLIN 430
           +R++S F+   SHE+RTP+  + + F  L    +   E RE   ++ + E    L QLI+
Sbjct: 697 DRLKSAFLANMSHEIRTPLNAI-VGFSDLLVDTENIEERRE--YIQIVKENNDLLLQLIS 753

Query: 431 DLLNFSRYQSGLQKLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPLP--RIQAD 488
           D+L+ S+ ++G  +       ++ L +    R  +    + +EL+   DP L   RI +D
Sbjct: 754 DILDLSKIEAGTFEFTNGDVDVNMLCEDIV-RSMQMKVKENVELM--FDPHLAECRIISD 810

Query: 489 VAQLDRVLDNLLHNAIRHTANGGRIRLHARRHAERVIISVEDNGEGISYGQQARIFEPFV 548
             +L +V+ N ++NAI+ T+ G  IR+  ++  E +   V+D G GI    QA IFE FV
Sbjct: 811 RNRLHQVISNFVNNAIKFTSEGS-IRVGYKQKGEELEFYVQDTGVGIDAESQAHIFERFV 869

Query: 549 QVGRKKGGAGLGLALCKEIVQLHGGRMGVFSRPGQGTQFYMALP 592
           ++     G GLGL++C+ IV+  GG++GV S PG+G++F+ +LP
Sbjct: 870 KLNSFVHGTGLGLSICQSIVEQMGGKIGVESEPGKGSRFWFSLP 913



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 381 ASHELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEMQRLTQLINDLLNF 435
           A  E  T   G   +FG++ +RV+ P E  + + L  + + ++R   +   LL F
Sbjct: 88  ALREKGTGTNGGDKSFGVI-QRVEAPKEVEQKNTLRRVNDLLRRQNYISQSLLRF 141