Pairwise Alignments

Query, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 263 a.a., amidase (AMPD protein) from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 1e-38
 Identities = 95/238 (39%), Positives = 117/238 (49%), Gaps = 17/238 (7%)

Query: 31  PSANQDNRI-----QFVVLHYTNASLERSLA---LLTHGEVSSHYLIGDGPATVYQLVDE 82
           PS N   R        ++LHYT      S          +VS HY + D    + QLV E
Sbjct: 15  PSPNHGERAGGRRPDMIILHYTGMETAASALDWLCREESQVSCHYFV-DEEGRIAQLVPE 73

Query: 83  NRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNGRVWHPYSEAQVQALIALLKDIV 142
            RRAWHAG+  W+G T +NS SIGIEI N G    P G    P  EAQ++A+  L  D  
Sbjct: 74  ERRAWHAGKGVWKGETDINSCSIGIEIANAGH---PGGLPDFP--EAQIEAVAELCLDCG 128

Query: 143 KRNNIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGLGIWPDANAVARQQAYFSVNPPS 202
           +R  I P  ++ HSDIAP+RK+DPG  FPW  L   G+G W +  A  R   +F      
Sbjct: 129 ERWQITPERVLAHSDIAPIRKVDPGENFPWDVLFRRGVGHWVEP-APVRGGRFFQRGDSG 187

Query: 203 --VGWYQQELARFGYQIEQTGVLDVATRHVVAAFQMRFRPQRFDGMPDAQTAAMLQVL 258
             V   Q  L  +GY +E TG     T  VVAAFQ  FR  R DG+ D  T   L  L
Sbjct: 188 QPVEALQSMLLLYGYGVEITGDFCARTEGVVAAFQRHFRQSRVDGIADVSTIDTLHRL 245