Pairwise Alignments

Query, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 457 a.a., PleD family two-component system response regulator from Rhodopseudomonas palustris CGA009

 Score =  132 bits (333), Expect = 3e-35
 Identities = 97/250 (38%), Positives = 135/250 (54%), Gaps = 19/250 (7%)

Query: 406 EHVDGLQSSVQGAADVDSLKHI-------LENR---LEGLLVTMDEHKHERDRREQELAG 455
           E+ DGL+   Q A  ++  +H+        EN    L GL + ++++   R   + EL  
Sbjct: 209 ENFDGLRLCSQ-ARSLERTRHVPILAIAEAENNARLLRGLEIGVNDYLL-RPVDKNELMA 266

Query: 456 RLQGLSERVASMEHEALGYREHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGG 515
           R +    R    +H     R++++   + A+ D LTGL NR      +          G 
Sbjct: 267 RARTQIRRRRYTDH----LRDNVQHSIEMAITDGLTGLHNRRYMESHLATLAEQAGARGK 322

Query: 516 HLAMAILDLDHFKRINDNYGHLAGDKVLKIVADQLRKRLRGRDFIARFGGEEFVMLLPQT 575
            LA+ ILD+D FK IND+YGH AGD VL+  A +++K +RG D   R+GGEEFV+++P+T
Sbjct: 323 PLALMILDIDFFKSINDSYGHDAGDDVLREFALRIKKSIRGIDLACRYGGEEFVIVMPET 382

Query: 576 TPAVAAQVAEVLRATVEACPFHF-KG-ERVVITTSIGLGAF-RSGERSDQVLKRADAALY 632
              VA  VAE LR  +   PF   KG  R+ +T SIGL    R GE    +LKRAD ALY
Sbjct: 383 DLHVAQMVAERLRRAIAGEPFAIEKGTRRIEVTISIGLSTLERKGEPIPDLLKRADTALY 442

Query: 633 RAKELGRNRV 642
           RAK  GRNRV
Sbjct: 443 RAKHDGRNRV 452