Pairwise Alignments

Query, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

Subject, 922 a.a., DNA polymerase I (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 1420 bits (3675), Expect = 0.0
 Identities = 738/922 (80%), Positives = 800/922 (86%), Gaps = 7/922 (0%)

Query: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD 60
           MSQAPLVLVDGSSYLYRAFHALPPLTTSKG+PTGAVKGVLNMLKSLRKQYPDS FAVVFD
Sbjct: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD 60

Query: 61  AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR 120
           AKGGTFRDA++AEYKANRPSMPDD+RVQIEPLHASVKALG+PLLCV+ VEADDVIGTLAR
Sbjct: 61  AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR 120

Query: 121 SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM 180
           SSAA  RPV+ISTGDKDMAQLVDGHITLVNTMTGS LDVAGV EKFGV PE IID+LALM
Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM 180

Query: 181 GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA 240
           GD  DNIPGVPG+G KTA GLL G+ GGL++LYA LD V  L IRGAKTL AKLEEH++ 
Sbjct: 181 GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVATLPIRGAKTLAAKLEEHKEM 240

Query: 241 AFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDV 300
           A LSYELATIK DVPLDV ++ L  G+PD E L  LYT +EFKSW  E QRDA +AG ++
Sbjct: 241 ALLSYELATIKTDVPLDVGLDDLQMGQPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI 300

Query: 301 AP-AVEPAVKVEAKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFAV 359
              A E     EAKYE ILDQARFDAWL KL +APLFAF TET G DAQ +QLVGLSFAV
Sbjct: 301 VEVAEEQPGAAEAKYEVILDQARFDAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV 360

Query: 360 EPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILAN----- 414
            P EAAY+PL H Y G P QLDR+ VL ALKPLLE+P K KVGQ+AK++ NILAN     
Sbjct: 361 APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAIDG 420

Query: 415 -GSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFN 473
             +  I ++G+A+DTMLESYVL+STATRHDMDSLA KYL  +   F+DIAGKG KQLTF+
Sbjct: 421 DQNNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD 480

Query: 474 QINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGALV 533
           QI+L+ AGPYAAEDAD+T RLH +LQ +LA TPS+  VL DIEMPL+PVLARIERQGALV
Sbjct: 481 QISLELAGPYAAEDADVTFRLHQSLQEKLAATPSLGTVLNDIEMPLMPVLARIERQGALV 540

Query: 534 DAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQP 593
           DA LL VQS ELG K+  LE  A+ +AGE FNLGSPKQLG ILY+KLG+PVLSKTAKGQ 
Sbjct: 541 DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA 600

Query: 594 STAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAAT 653
           STAEAVL ELA Q YPLP+VLMQYRSLSKLKSTYTD+LP QIN RTGR+HT+YQQAVAAT
Sbjct: 601 STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT 660

Query: 654 GRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHA 713
           GRLSS DPNLQNIPIRTAEGRRIRQAFIA  GYKLLAADYSQIELRIMAHLAKDEGLLHA
Sbjct: 661 GRLSSIDPNLQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA 720

Query: 714 FRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQD 773
           FR++LDVHRATAAEVFGV LE VT DQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQ 
Sbjct: 721 FRHNLDVHRATAAEVFGVELEAVTQDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA 780

Query: 774 YIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINA 833
           YIDRYFARYPGVLAYMERTRAQAAEQGFVET+FGRRLYLPDINAKNPALRKGAERTAINA
Sbjct: 781 YIDRYFARYPGVLAYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA 840

Query: 834 PMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQ 893
           PMQGTAADIIK+AMV VD WL+ SGLDA+VILQVHDELVLEVREDLV QV++EIRQHMS 
Sbjct: 841 PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA 900

Query: 894 AAQLDVPLLVEAGVGANWDEAH 915
           AA LDVPLLVE GVG NWDEAH
Sbjct: 901 AATLDVPLLVEVGVGNNWDEAH 922