Pairwise Alignments

Query, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

Subject, 914 a.a., DNA polymerase I from Pseudomonas stutzeri RCH2

 Score = 1377 bits (3565), Expect = 0.0
 Identities = 709/916 (77%), Positives = 794/916 (86%), Gaps = 3/916 (0%)

Query: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD 60
           MSQAPL+LVDGSSYLYRAFHALPPLTTS G PTGAVKGVLNML SLR+QYPDS FAVVFD
Sbjct: 1   MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD 60

Query: 61  AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR 120
           AKG TFRDA+F  YK++RP MPDDLR Q+EPLHASV+ALG PLLCVEGVEADDVIGTLAR
Sbjct: 61  AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR 120

Query: 121 SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM 180
             AALGR V+ISTGDKDMAQLV  H+TLVNTMTGSV D+ GV  KFGVGPE IIDFLALM
Sbjct: 121 QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALM 180

Query: 181 GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA 240
           GDKVDNIPGVPGVGEKTA GLL GI GGL  LY NLD+V  L IRGAK+L AKL EHRDA
Sbjct: 181 GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA 240

Query: 241 AFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDV 300
           AF+SYELATIK+DVPLDVEV  L+ GEP REAL+ALY E+EFK+W+ +L R+A  AG++ 
Sbjct: 241 AFMSYELATIKIDVPLDVEVGDLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC 300

Query: 301 APAVEP-AVKVEAKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFAV 359
               E  +++ EA+YET+L+QA F+ WL++L+ A  FAFDTETT +DAQ+A+LVG+SFA+
Sbjct: 301 EVQPEGCSIQAEAQYETLLEQADFERWLDRLKTAECFAFDTETTSIDAQRAELVGVSFAI 360

Query: 360 EPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANGSPAI 419
           EP +AAYVPL H Y G P QL+ +AVL ALKPLLEDPAK K+ Q+ KYD+N+L +    I
Sbjct: 361 EPGQAAYVPLRHSYMGVPQQLELDAVLAALKPLLEDPAKTKICQHGKYDMNVLMHYG--I 418

Query: 420 EMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQINLDK 479
           EMRG+ +DTMLESYVL++TATRHDMDSLA KYL   TI FEDIAGKGAKQLTF+QI +++
Sbjct: 419 EMRGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQ 478

Query: 480 AGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGALVDAELLK 539
           AGPYAAEDAD+TLRLH  L  +L QTPS+  VL +IEMPLVPVLARIER GALVDA+LL 
Sbjct: 479 AGPYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLG 538

Query: 540 VQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQPSTAEAV 599
            QS ELG K+ +LE  A+E+AGE FNLGSPKQL  ILYDKLG PV+SKTA GQPSTAE+V
Sbjct: 539 QQSVELGDKLVQLEREAFEIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESV 598

Query: 600 LDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSS 659
           L ELA Q YPLP+V+MQ+RSLSKLK TYTDKLP QINPRTGRIHTSY QAV ATGRLSSS
Sbjct: 599 LAELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSS 658

Query: 660 DPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLD 719
           DPNLQNIPIRTAEGRRIRQAF+A+PGYKLLAADYSQIELRIMAHLA+D GLLHAF+NDLD
Sbjct: 659 DPNLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLD 718

Query: 720 VHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYF 779
           VHRATAAEVFGV LE V+ DQRRSAKAINFGLIYGMSAFGLAKQI V RK++Q+YIDRYF
Sbjct: 719 VHRATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYF 778

Query: 780 ARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTA 839
           ARYPGVLAYMERTR QAAEQG+VETLFGRRLYLP+IN+KN A+RKGAERTAINAPMQGTA
Sbjct: 779 ARYPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTA 838

Query: 840 ADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQAAQLDV 899
           ADIIKRAM+ VD WL +SGLDARVILQVHDELVLEVREDLV+QV++ I   MS AAQLDV
Sbjct: 839 ADIIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPLMSGAAQLDV 898

Query: 900 PLLVEAGVGANWDEAH 915
           PLLVEAGVG NWDEAH
Sbjct: 899 PLLVEAGVGNNWDEAH 914