Pairwise Alignments

Query, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

Subject, 921 a.a., DNA polymerase I from Pseudomonas syringae pv. syringae B728a

 Score = 1430 bits (3701), Expect = 0.0
 Identities = 727/921 (78%), Positives = 806/921 (87%), Gaps = 6/921 (0%)

Query: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD 60
           M+QAPLVLVDGSSYLYRAFHALPPL TSKG+PTGAVKGVLNMLKSLR+QYPDS  AVVFD
Sbjct: 1   MTQAPLVLVDGSSYLYRAFHALPPLATSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFD 60

Query: 61  AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR 120
           AKGGTFRDA++ +YKANRPSMPDDLRVQ++ LHA VK +GYP LCVEGVEADDVIGTLAR
Sbjct: 61  AKGGTFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR 120

Query: 121 SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM 180
           SSAA  RPV+ISTGDKDMAQLVDGHITLVNTMTGSVLDVAGV EKFGVGPEHIID+LALM
Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM 180

Query: 181 GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA 240
           GDKVDNIPGVPGVGEKTAVGLL GIGGG+ +LY NLDKV +L IRGAKTL AKLEEHR+ 
Sbjct: 181 GDKVDNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHREM 240

Query: 241 AFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDV 300
           AFLSYELATIK+DVPLD+E++ L CGEPDR+ L+ LY E+EFKSW+ +LQRDA +AG ++
Sbjct: 241 AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL 300

Query: 301 APAVEPAVKVEAKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFAVE 360
                 A   EA YE IL+Q +FDAWL+KL+ APLFAF T++ G DAQ+AQLVGLSFA++
Sbjct: 301 TIEEPTAEAREAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAIQ 360

Query: 361 PHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILAN------ 414
            HEAAY+PL H Y G P QLDR+ VL ALKPLLEDP K KVGQ+AK+ IN+LAN      
Sbjct: 361 THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKIKVGQHAKFAINLLANCAIDGD 420

Query: 415 GSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQ 474
            +  I+++GV +DT+LESYVL+STATRHD DSL  KYL HT I F++IAGKGAKQL+F+Q
Sbjct: 421 QAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQLSFDQ 480

Query: 475 INLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGALVD 534
           I L++AG YAAE+AD+TLRLH    ARLA  P++QPVL DIEMPLVPVLARIERQGALVD
Sbjct: 481 IALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPVLNDIEMPLVPVLARIERQGALVD 540

Query: 535 AELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQPS 594
           A LL +QS ELG KM  LE  A+ +AGE FNLGSPKQLG ILY+KLGMP+LSKTA GQ S
Sbjct: 541 ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS 600

Query: 595 TAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATG 654
           TAEAVL ELA Q +PLP+VLMQYRS+SKLKSTYTD+LP QINPRTGRIHTSY QAVA TG
Sbjct: 601 TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG 660

Query: 655 RLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAF 714
           RLSSSDPNLQNIPIRTAEGRRIRQAF+A  GYKLLAADYSQIELRIMAHLA+DEGLLHAF
Sbjct: 661 RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF 720

Query: 715 RNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDY 774
           RNDLDVHRATAAEVFGV LE+VTTD RRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQ Y
Sbjct: 721 RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY 780

Query: 775 IDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAP 834
           +DRYFARYPGVL YMERTRAQAAEQGFVET+FGRRLYLPDINAKN +LRKGAER AINAP
Sbjct: 781 VDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAP 840

Query: 835 MQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQA 894
           MQGTAADIIK+AMV V+ WL ESGLDARVILQVHDELVLEVREDLV Q+ ++IR HMS A
Sbjct: 841 MQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA 900

Query: 895 AQLDVPLLVEAGVGANWDEAH 915
           A+L VPLLVE GVG NWDEAH
Sbjct: 901 AELAVPLLVEVGVGNNWDEAH 921