Pairwise Alignments

Query, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

Subject, 910 a.a., DNA polymerase I from Dechlorosoma suillum PS

 Score =  954 bits (2465), Expect = 0.0
 Identities = 514/920 (55%), Positives = 638/920 (69%), Gaps = 23/920 (2%)

Query: 6   LVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPD---SLFAVVFDAK 62
           L+LVDGSSYLYRAFHALP L    G PTGA+ GVLNML+ L   Y     +  AVVFDAK
Sbjct: 4   LLLVDGSSYLYRAFHALPDLRNKAGEPTGAIYGVLNMLRRLESDYKAEGVTYKAVVFDAK 63

Query: 63  GGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLARSS 122
           G TFRD  + EYKA RP MP DL  QIEPLHA++KA G+PLL  +GVEADDVIGTLAR +
Sbjct: 64  GKTFRDDWYPEYKAQRPPMPTDLVAQIEPLHAAIKASGWPLLMEDGVEADDVIGTLARQA 123

Query: 123 AALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALMGD 182
            A G  V+ISTGDKD+ QLV   +  VNTM+  VLD AGV  KFGV P  I+D+LAL+GD
Sbjct: 124 EAAGMDVVISTGDKDLTQLVSPRVRWVNTMSNEVLDEAGVTAKFGVEPGRIVDYLALIGD 183

Query: 183 KVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDAAF 242
            VDN+PGV  VG KTA+  L        + Y  LD + A A      +   L +  D   
Sbjct: 184 TVDNVPGVAKVGPKTALKWL--------EQYGTLDNIMANAEAIGGVVGNNLRQALDFLP 235

Query: 243 LSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGD---- 298
           L  +L T+  D+PL     +L     D+ AL  +++  EFK+W+ ELQ + A AGD    
Sbjct: 236 LGKKLVTVVCDLPLPETPASLAPRPLDKAALEEIFSRYEFKTWLRELQGEGAAAGDAEAA 295

Query: 299 ---DVAPAVEPAVKVEAKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGL 355
                APA  PA      YETIL    F+ WL K++ APL A DTETT LD   A++VG+
Sbjct: 296 GDATTAPAA-PAGAHRQHYETILTWEAFERWLAKIQAAPLVALDTETTSLDPLSARIVGI 354

Query: 356 SFAVEPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANG 415
           SFA+ P EAAY+P+AH+Y GAP QL RE VL  LKP LE    AK+GQN KYD ++ AN 
Sbjct: 355 SFALTPGEAAYIPVAHNYPGAPDQLPREQVLARLKPWLEASNHAKLGQNLKYDQHVFANH 414

Query: 416 SPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQI 475
              I ++G+ +DT+L+SYVL S    HD++ LA+++L   TI +  + GKGA Q+ F+Q+
Sbjct: 415 D--IALKGIVHDTLLQSYVLESDKG-HDLEQLARRHLGLETIPYTALCGKGANQIGFDQV 471

Query: 476 NLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGALVDA 535
            +D+A  Y+AED+D+TLR+H  L   +A    +  +  DIEMP   VL  +ER G L+D+
Sbjct: 472 AIDQAAEYSAEDSDLTLRVHQNLFPAIAADAKLNCIYSDIEMPAREVLFAMERHGVLIDS 531

Query: 536 ELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQPST 595
            LL+ QS ELG K+ ELE +A E+AG+ FNL SPKQL  IL+ +LG+PV+ KT  G PST
Sbjct: 532 GLLQAQSNELGRKLVELEAKAVEIAGQPFNLNSPKQLAEILFTQLGLPVVKKTPGGAPST 591

Query: 596 AEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGR 655
            E VL ELAL  YPLP+ L++YR L+KLKSTYTDKLP  +NP TGR+HTS+ QAVA TGR
Sbjct: 592 DEEVLSELALD-YPLPKALLEYRGLAKLKSTYTDKLPRMVNPHTGRVHTSFSQAVAVTGR 650

Query: 656 LSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFR 715
           L+SSDPNLQNIP+RTAEGRRIR AFIA PG K+++ADYSQIELRIMAHL+ D GLL AF 
Sbjct: 651 LASSDPNLQNIPVRTAEGRRIRAAFIAPPGCKIVSADYSQIELRIMAHLSGDHGLLDAFA 710

Query: 716 NDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYI 775
              DVHRATAAE+FG+   +VT +QRR AK INFGLIYGMSAFGLA+ + ++R  +Q YI
Sbjct: 711 KGEDVHRATAAEIFGIMPLEVTAEQRRYAKTINFGLIYGMSAFGLARSLEIERSAAQTYI 770

Query: 776 DRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPM 835
           +RYFARYPGV  YME TR  A  QG+VET+FGRRL+LPDI A     R+GAER AINAPM
Sbjct: 771 ERYFARYPGVARYMEETRELAKRQGYVETVFGRRLWLPDIRASQAGRRQGAERAAINAPM 830

Query: 836 QGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQAA 895
           QGTAADI+K AM     WL++SGL + ++LQVHDELVLEV E  + +V+ E+   M Q A
Sbjct: 831 QGTAADIVKLAMTATARWLADSGLQSSLVLQVHDELVLEVPEGELARVRAELPAIMGQVA 890

Query: 896 QLDVPLLVEAGVGANWDEAH 915
           +L VPL+V+ GVG NWDEAH
Sbjct: 891 KLAVPLVVDVGVGNNWDEAH 910