Pairwise Alignments

Query, 359 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 304 a.a., putative cytochrome aa3 controlling protein from Synechococcus elongatus PCC 7942

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 81/305 (26%), Positives = 120/305 (39%), Gaps = 67/305 (21%)

Query: 18  LVVLLGAYTRLTHAGLGCPDWPGCYGFISVPKTDVQLAHAELHFPEHPVEAAKGWAEMVH 77
           L++ +G  TR+ +AGL CPDWP CYG             + L + +  ++    W   + 
Sbjct: 22  LLIGIGGATRVMNAGLACPDWPLCYG-------------SWLPWQQFNLQVFLEWFHRLD 68

Query: 78  RYFAGSLAVVIALLAFQAMRRHARDGQPYRLPMLLLGVVL---AQAAFGMWTVTLKLWPQ 134
               G   +VIAL+A++     +R   P   P    G +L    QA  G  TVT  L   
Sbjct: 69  AAVVGCGTLVIALVAWR-----SRSQLPRFWPWAATGALLLVGLQATLGALTVTELLRFD 123

Query: 135 VVTAHLLGGFTTLSLLFLLSLRLSRAFAPLPKLPLSL-----RRIAALALLVVIGQIALG 189
           +VTAHL       +LLF +SL L    A  P+ PL+      R +  +  + V GQ  LG
Sbjct: 124 LVTAHL-----GTALLFFVSL-LGLQAALQPRSPLNAGQSLPRLLLLVTAIAVYGQCLLG 177

Query: 190 GWVSANYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGPNYLGGQLDSDARTAIHISHR 249
             V + +A   C+                              G QL       +  SH 
Sbjct: 178 ALVGSRWALHQCL-----------------------------AGSQL-----CTVLQSHL 203

Query: 250 LGALLVTCVLLMLSWKLHRCGLPGLSRLVLLALALQVGLGISNVVFHLPL-AVAVAHNAG 308
            G    T +++ LS      G    +  +   L LQ+ LG     +HL +  + + H   
Sbjct: 204 WGIAPTTLLVISLSVVAWLRGQHRWASQIAALLGLQLLLGWGTYFWHLQIEPLTIGHQMV 263

Query: 309 GAMLL 313
           GA LL
Sbjct: 264 GAALL 268



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 32/149 (21%)

Query: 176 ALALLVVIGQIALGGWVSANYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGPNYLGGQ 235
           A+A  ++IG   +GG      A +AC D P C+G W P   F                  
Sbjct: 17  AIATWLLIG---IGGATRVMNAGLACPDWPLCYGSWLPWQQF------------------ 55

Query: 236 LDSDARTAIHISHRLGALLVTC---VLLMLSWKLHRCGLPGL----SRLVLLALALQVGL 288
              + +  +   HRL A +V C   V+ +++W+  R  LP      +   LL + LQ  L
Sbjct: 56  ---NLQVFLEWFHRLDAAVVGCGTLVIALVAWR-SRSQLPRFWPWAATGALLLVGLQATL 111

Query: 289 GISNVVFHLPLAVAVAHNAGGAMLLLSMV 317
           G   V   L   +  AH     +  +S++
Sbjct: 112 GALTVTELLRFDLVTAHLGTALLFFVSLL 140