Pairwise Alignments

Query, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

Subject, 290 a.a., cytochrome c oxidase subunit III coxC from Caulobacter crescentus NA1000

 Score =  219 bits (558), Expect = 6e-62
 Identities = 123/302 (40%), Positives = 165/302 (54%), Gaps = 34/302 (11%)

Query: 4   HEHYYVPAQSKWPIIATIGMFITVFGLGTWFNDMKAGHPDSHGPLIFFVGALFLAYMLFG 63
           H+++ +P  S WP + +    +   GL  W      G    +   IF  G   + Y +FG
Sbjct: 7   HDYHILPP-SPWPFVGSAAATVMAIGLIGWLKGGVLGIEKGNWA-IFAAGMAGILYTMFG 64

Query: 64  WFGAVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGEGA 123
           W+  V KES+AG ++P +    R+GM  FI SEVMFF+A+F            W+  E A
Sbjct: 65  WWADVAKESKAGDHTPVVSIGLRYGMILFIASEVMFFVAWF------------WMFFEMA 112

Query: 124 KGVTHMLWPTFE------FTWPLLHTPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTIT 177
               H    T E        WP          P   E +  WHLPLINT+ L+ S  T+T
Sbjct: 113 LFHEHRTLSTIEEVRTAWAAWP----------PAGVETVSAWHLPLINTLTLLLSGTTVT 162

Query: 178 IAHHALRRDHRGPLKFWMALTIVLGISFIALQAFEY----YEAYTKLGLTLGSGIYGATF 233
            AHHAL+   R   K+ + LTIVLG  F A+Q +EY    +E          SG+YG+TF
Sbjct: 163 WAHHALQVGDRKGAKWGLILTIVLGCLFTAIQVYEYAHINHEQLFYSEAAANSGLYGSTF 222

Query: 234 FMLTGFHGAHVTLGTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVY 293
           F+ TGFHG HV +GT+ LIV  +R++ G F P+KHFGFEAA+WYWHFVDVVW+ LF F+Y
Sbjct: 223 FLATGFHGFHVFVGTLFLIVCLIRLMTGAFTPQKHFGFEAAAWYWHFVDVVWLFLFAFIY 282

Query: 294 VL 295
           V+
Sbjct: 283 VI 284