Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 593 a.a., alternative cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  400 bits (1029), Expect = e-116
 Identities = 212/520 (40%), Positives = 292/520 (56%), Gaps = 24/520 (4%)

Query: 24  RWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPG-LQIVEPAFFNQMTTMHGL 82
           R+V + + K I   Y   +  + ++    + +IR +L  PG  ++++   + Q  TMHG+
Sbjct: 32  RYVFSQDAKIIAIQYSMTAIAIGMVALVLSWLIRLQLGFPGTFELIDAERYYQFITMHGM 91

Query: 83  IMVFGAVMPAFVG-LANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGP 141
           IMV   +   F+G   N++IPLM+GA DM  P  N  S+W+   A ++L ++ F+PGG  
Sbjct: 92  IMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYANMLSYWIYLLAVIVLAASFFTPGGPT 151

Query: 142 NFGWTFYAPLSTTYAPAS-----VTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLM 196
             GWT Y P +            +   + ++ +  I   MG +N + T+L  RA GMTLM
Sbjct: 152 GAGWTLYPPQAVLSGTPGGRDWGIIMMLSSLIIFVIGFTMGGLNYVVTVLQGRARGMTLM 211

Query: 197 KMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAA----------GGGDPV 246
           ++PL VW       + +   P L     MML D   GTSFF  A          GGG P+
Sbjct: 212 RLPLTVWGIFTATVMALLAFPALFVACVMMLFDRLLGTSFFMPAIVEMGEQLQYGGGSPI 271

Query: 247 LFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAH 306
           LFQH+FWFFGHPEVYI+ LPAFG VS +I   +RK +FGY  MV+A   I  LSFIVWAH
Sbjct: 272 LFQHLFWFFGHPEVYIVALPAFGIVSDLISTHARKNIFGYRMMVWAIVIIGGLSFIVWAH 331

Query: 307 HMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTI 366
           HM+V G+      FF   T++IAVPT +KV+NWV T+W G++    PMLFA+AF++ F  
Sbjct: 332 HMYVSGMNPYFGFFFATTTLIIAVPTAIKVYNWVLTLWRGNIHLTLPMLFALAFIVTFVN 391

Query: 367 GGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLG 426
           GG +GL L     D    DT FVVAHFH V+    I  IF + Y+W PK TG M +E +G
Sbjct: 392 GGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVIFGAIYHWYPKITGRMLNEAMG 451

Query: 427 KLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPD------YNLQFADFNMVSSIGAFMFGAT 480
           ++HFW++F+G    FFPMH++GL G+PRR  +           A+ N   S+ A + GA 
Sbjct: 452 QIHFWVTFIGAYAIFFPMHYLGLIGVPRRYHELGEASFVTTSIAELNAFISVMALLVGAA 511

Query: 481 QIFFLFIVIKCIRGGAPAPAKPWDGAEGLEWSIPSPAPYH 520
           QI FLF +   +R G  A   PW  A  LEW  P   P H
Sbjct: 512 QIVFLFNLAWSLRHGREAGGNPW-RATTLEWQTPETPPPH 550