Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 562 a.a., cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  618 bits (1594), Expect = 0.0
 Identities = 305/550 (55%), Positives = 385/550 (70%), Gaps = 27/550 (4%)

Query: 7   DHA-HGH-DHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPG 64
           DH+ HGH DHAH P     RW L+TNHKDIGT+YL F+ I  ++GG+ ++ +RAEL +PG
Sbjct: 13  DHSDHGHADHAHKPLTFFQRWFLSTNHKDIGTLYLIFAIIAGIIGGTLSVFMRAELQEPG 72

Query: 65  LQIVEPA------------------FFNQMTTMHGLIMVFGAVMPAFVG-LANWMIPLMI 105
           +QI                       FN  TT H LIM+F  VMPA +G  ANWM+P+MI
Sbjct: 73  IQIFHGLAQMVYGFEGDAAIDGGKHMFNVFTTAHALIMIFFMVMPALIGGFANWMVPIMI 132

Query: 106 GAPDMALPRMNNFSFWLLPAAFLLLVSTLF--SPGG--GPNFGWTFYAPLSTTYAPA-SV 160
           GAPDMA PRMNN SFWL+  AFLL++ ++F   P G  G   GWT Y P ST+  P  ++
Sbjct: 133 GAPDMAFPRMNNISFWLIVPAFLLVLLSMFVEGPAGAYGAGGGWTIYPPFSTSGMPGPAM 192

Query: 161 TFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLA 220
              I  +H+ G SSI+GAIN I TILN+RAPGMTL KMPLF W+ LITAFLL+  +PVLA
Sbjct: 193 DLAILGLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFAWSVLITAFLLLLSLPVLA 252

Query: 221 GVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSR 280
           G +TM+L D +FGT+FF+  GGGDP+LFQH+FWFFGHPEVYI+ILP FG VS II  FSR
Sbjct: 253 GAITMLLTDRNFGTTFFAPEGGGDPILFQHLFWFFGHPEVYILILPGFGIVSHIISTFSR 312

Query: 281 KPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWV 340
           KP+FGY  M YA  AI  + FIVWAHHM+ VG+ +  + +F++ATM+IAVPTGVK+F+W+
Sbjct: 313 KPIFGYLGMAYAMVAIGAVGFIVWAHHMYTVGMSLQTQRYFVFATMVIAVPTGVKIFSWI 372

Query: 341 STMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPG 400
           +TMW GS+ F TPM++AI F+ LFT+GG +G+ LA A  D   HDTY+VVAHFHYVL  G
Sbjct: 373 ATMWGGSIRFATPMVWAIGFIFLFTVGGVTGVQLANAGLDRALHDTYYVVAHFHYVLSLG 432

Query: 401 AIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYN 460
           A+F IFA+ YYW PK TG+MY E LGKLHFW+ FVG+N+ FFP HF+GLAGMPRR  DY 
Sbjct: 433 AVFAIFAAWYYWFPKMTGYMYSEFLGKLHFWVMFVGVNLIFFPQHFLGLAGMPRRYIDYP 492

Query: 461 LQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRGGAPAPAKPW-DGAEGLEWSIPSPAPY 519
             FA +NMVSS G+++     + FLF V +       A   PW +GA  LEW + SP P+
Sbjct: 493 DAFAGWNMVSSYGSYIAAVGVLIFLFCVAEAFAKKRVAGDNPWGEGANTLEWQLSSPPPF 552

Query: 520 HTFQTPPEVK 529
           H ++  P +K
Sbjct: 553 HQWEQLPRIK 562