Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 841 a.a., cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  406 bits (1044), Expect = e-117
 Identities = 206/494 (41%), Positives = 298/494 (60%), Gaps = 8/494 (1%)

Query: 24  RWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMHGLI 83
           R V   N+  IG +YL  +F+ FL+ G  A+V+R +L     ++V+   +NQM T+HG  
Sbjct: 29  RLVTAVNNTVIGLLYLGVAFLFFLMAGLLAVVMRTQLALGDNRLVDQDLYNQMFTVHGTT 88

Query: 84  MVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNF 143
           M+F   +PA   L   ++P M+ A D+  PR++ F+ W      L+  ST+F     P  
Sbjct: 89  MMFLFAVPAVEALGVMLLPQMLAARDLPFPRLSAFAIWAYVVGGLVFFSTIFYDLA-PKG 147

Query: 144 GWTFYAPLSTT-YAPA-SVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLF 201
           GW  Y PL+   Y+P  +  F++  I  + IS+I GA+ ++   L  R PGM+L KMP+F
Sbjct: 148 GWFMYPPLTLMEYSPGDNADFWLLGIGFIEISAIAGAVEIVVGALRTRPPGMSLAKMPIF 207

Query: 202 VWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVY 261
            WT LI A +++   P +     M+ ++  FG  FF+AA GGDP+L+QH+FWFFGHPEVY
Sbjct: 208 AWTMLIFASMIMFAFPAVILATMMLEIERAFGWPFFTAALGGDPLLWQHLFWFFGHPEVY 267

Query: 262 IMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFF 321
           I+ LPA G VS ++P  +R PL GY  +V A     F SF +W HHMF  GIP +   FF
Sbjct: 268 IIFLPAAGLVSMMVPTMARTPLVGYHLIVVALIGTGFFSFGLWVHHMFTTGIPALSLAFF 327

Query: 322 MYATMLIAVPTGVKVFNWVSTMWEGSLTFE--TPMLFAIAFVILFTIGGFSGLMLAIAPA 379
             A+M +AVP+G++VF+W++T+  G   F   T  LF + F+ +FT+GG +G+M+A+ P 
Sbjct: 328 SAASMAVAVPSGIQVFSWIATIAAGRERFRITTASLFILGFLFIFTLGGLTGVMVAMVPF 387

Query: 380 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 439
           D Q HDTYFVVAHFHYVL+ G +F +FA+ YYW+P ++  M  E LG+  FWL F+G N+
Sbjct: 388 DHQVHDTYFVVAHFHYVLIGGFVFPLFAAIYYWMPLFSRRMLSERLGRWVFWLIFIGFNV 447

Query: 440 AFFPMHFVGLAGMPRRIPDY--NLQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRGGAP 497
            F PMH  GL GMPRR+  Y   + +   N++S++G ++     + FL  +    R G  
Sbjct: 448 TFLPMHLTGLRGMPRRVWTYPGEMGWDTLNLISTVGTYVLAVGVLVFLVDLAAKFRLGNG 507

Query: 498 APAKPWDGAEGLEW 511
               PW GA  LEW
Sbjct: 508 PQENPW-GAGTLEW 520