Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 541 a.a., cytochrome c oxidase subunit I from Rhodopseudomonas palustris CGA009

 Score =  625 bits (1613), Expect = 0.0
 Identities = 304/531 (57%), Positives = 384/531 (72%), Gaps = 9/531 (1%)

Query: 7   DHAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQ 66
           +HAH  DHAH    G  R++ +TNHKDIGTMYL F+ +  ++G + ++ IR EL  PG+Q
Sbjct: 12  EHAHD-DHAHAHPTGWRRYLYSTNHKDIGTMYLVFAVMAGVIGAAMSIAIRVELMFPGIQ 70

Query: 67  IVEPAF-FNQMTTMHGLIMVFGAVMPAFVG-LANWMIPLMIGAPDMALPRMNNFSFWLLP 124
           I      +N   T HGLIM+F  VMPA +G   NW +PLMIGAPDMA PRMNN SFWLLP
Sbjct: 71  IFHNTHTYNVFVTSHGLIMIFFMVMPAMIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLP 130

Query: 125 AAFLLLVSTLFSPG----GGPNFGWTFYAPLSTTYAPA-SVTFFIFAIHLMGISSIMGAI 179
           AAF LL+ + F  G     G   GWT YAPLST   P  +V F I A+HL G SSI+GAI
Sbjct: 131 AAFALLIISTFVEGEPSSNGVGAGWTMYAPLSTIGHPGPAVDFAILALHLAGASSILGAI 190

Query: 180 NVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSA 239
           N I TI N+RAPGMTL KMPLFVW+ LITAFLL+  +PVLAG +TM+L D +FGT+FFSA
Sbjct: 191 NFITTIFNMRAPGMTLHKMPLFVWSVLITAFLLLLSLPVLAGAITMLLTDRNFGTTFFSA 250

Query: 240 AGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFL 299
            GGGDP+LFQH+FWFFGHPEVYI+ILP FG +S I+  FS+KP+FGY  M YA  AI  +
Sbjct: 251 EGGGDPLLFQHLFWFFGHPEVYILILPGFGMISQIVSTFSKKPVFGYLGMAYAMVAIGVI 310

Query: 300 SFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIA 359
            F+VWAHHM+ VG+    + +F+ ATM+IAVPTGVKVF+W++TMW GS+ F+TPML+A+ 
Sbjct: 311 GFVVWAHHMYTVGMSSTTQAYFVAATMVIAVPTGVKVFSWIATMWGGSIEFKTPMLWAVG 370

Query: 360 FVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGH 419
           F+ LFT+GG +G++LA A  D    DTY+VVAHFHYVL  GA+F IFA  YYW PK TG+
Sbjct: 371 FIFLFTVGGVTGVVLANAGVDRVLQDTYYVVAHFHYVLSLGAVFAIFAGWYYWFPKMTGY 430

Query: 420 MYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGA 479
           MY+ET+GKLHFWL+F+G+NM FFP HF+GL+GMPRR  DY   FA +N+VSSIG+++ G 
Sbjct: 431 MYNETIGKLHFWLTFIGVNMVFFPQHFLGLSGMPRRYVDYPDAFAGWNLVSSIGSYISGF 490

Query: 480 TQIFFLFIVIKCIRGGAPAPAKPWD-GAEGLEWSIPSPAPYHTFQTPPEVK 529
             + FL+ +         A   PW  GA  LEW++ SP P+H F+  P+V+
Sbjct: 491 AVLVFLYGMTLAFIRKERAADNPWGAGATTLEWTLSSPPPFHQFEVLPQVR 541