Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 557 a.a., cytochrome c oxidase subunit 1-beta from Phaeobacter inhibens DSM 17395

 Score =  551 bits (1419), Expect = e-161
 Identities = 266/544 (48%), Positives = 363/544 (66%), Gaps = 27/544 (4%)

Query: 8   HAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQI 67
           H HGH+   G      RW ++TNHKDIG +YL  S I+  +  +F + +R EL  PG+Q 
Sbjct: 7   HGHGHEDERG---FFTRWFMSTNHKDIGILYLIVSAIVGFISVAFTVYMRLELMDPGVQY 63

Query: 68  V-----------------EPAFFNQMTTMHGLIMVFGAVMPA-FVGLANWMIPLMIGAPD 109
           +                     +N + T HG++M+F  V+PA F G  N+ +PL IGAPD
Sbjct: 64  MCLEGARLFADASAECTPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLQIGAPD 123

Query: 110 MALPRMNNFSFWLLPAAFLLLVSTLFSPGG----GPNFGWTFYAPLSTTYAPASVTFFIF 165
           MA PRMNN SFW+  A   L V+++ +PGG    G   GW  Y PLST     S+   IF
Sbjct: 124 MAFPRMNNLSFWMYVAGTSLAVASVLAPGGNDQAGSGVGWVLYPPLSTNEGGFSMDLAIF 183

Query: 166 AIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTM 225
           A+H+ G SSI+GAIN+I T LN+RAPGMTL K+PLF W+  +T++L++  +PVLAG +TM
Sbjct: 184 AVHVSGASSILGAINMITTFLNMRAPGMTLFKVPLFSWSIFVTSWLILLSLPVLAGAITM 243

Query: 226 MLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFG 285
           +LMD +FG +FF  AGGGDP+L+QH+ WFFGHPEVYI+ILP FG +S +I  F+RKP+FG
Sbjct: 244 LLMDRNFGFTFFDPAGGGDPILYQHILWFFGHPEVYIVILPGFGIISHVIATFARKPVFG 303

Query: 286 YTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMWE 345
           Y  MV+A  AI  L F+VWAHHM+ VG+ +  + +FM ATM+IAVPTGVKVF+W++TMW 
Sbjct: 304 YLPMVWAIIAIGVLGFVVWAHHMYTVGMSLNQQAYFMLATMVIAVPTGVKVFSWIATMWG 363

Query: 346 GSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGI 405
           GS+ F+ PM+FA  F+ LFT+GG +G++L+ A  D  YHDTY+VVAHFHYV+  GA+F I
Sbjct: 364 GSIEFKAPMMFAFGFLFLFTVGGVTGVVLSQASVDRAYHDTYYVVAHFHYVMSLGAVFAI 423

Query: 406 FASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFAD 465
           F+  Y++  K TG  Y+E   ++HFW+ F+G N+ FFP HF+G  GMPRR  DY   FA 
Sbjct: 424 FSGIYFYFGKMTGRQYNELGAQIHFWMFFIGANLTFFPQHFLGRQGMPRRYIDYPEGFAY 483

Query: 466 FNMVSSIGAFM-FGATQIFFLFIVIKCIRGGAPAPAKPW-DGAEGLEWSIPSPAPYHTFQ 523
           +N +SS GAF+ F +  +FF  ++   +RG        W + A+ LEW++PSP P HTF+
Sbjct: 484 WNKISSYGAFLSFASFLLFFGVVIYSLLRGARITQNNYWNEYADTLEWTLPSPPPEHTFE 543

Query: 524 TPPE 527
             P+
Sbjct: 544 ILPK 547