Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 558 a.a., Cytochrome c oxidase subunit I type (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  571 bits (1472), Expect = e-167
 Identities = 281/544 (51%), Positives = 371/544 (68%), Gaps = 28/544 (5%)

Query: 8   HAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQI 67
           H HGH+   G      RW ++TNHKDIG +Y+  + +   +  +F + +R EL  PG+Q 
Sbjct: 7   HGHGHEDTRG---FFTRWFMSTNHKDIGILYILVAGLAGFISVAFTVYMRMELMNPGVQY 63

Query: 68  V--EPAFF----------------NQMTTMHGLIMVFGAVMPA-FVGLANWMIPLMIGAP 108
           +  E A F                N + T HG++M+F  V+PA F G  N+ +PL IGAP
Sbjct: 64  MCTEGARFIAAGANDVCTPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLHIGAP 123

Query: 109 DMALPRMNNFSFWLLPAAFLLLVSTLFSPGG----GPNFGWTFYAPLSTTYAPASVTFFI 164
           DMA PR+NN SFWL  A   L ++++ +PGG    G   GW  Y PLSTT A  S+   I
Sbjct: 124 DMAFPRLNNLSFWLYVAGTSLAIASVLAPGGNGQTGSGVGWVLYPPLSTTEAGFSMDLAI 183

Query: 165 FAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVT 224
           FA+H+ G SSI+GAIN+I T LN+RAPGMTL K+PLF W+  +TA+L++  +PVLAG +T
Sbjct: 184 FAVHVSGASSILGAINIITTFLNMRAPGMTLFKVPLFAWSIFVTAWLILLALPVLAGAIT 243

Query: 225 MMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLF 284
           M+L D +FGT+FF  AGGGDPVL+QH+ WFFGHPEVYI+ILPAFG +S +I  FSRKP+F
Sbjct: 244 MLLTDRNFGTTFFDPAGGGDPVLYQHILWFFGHPEVYIVILPAFGIISHVIATFSRKPVF 303

Query: 285 GYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMW 344
           GY  MV+A  AI  L F+VWAHHM+ VG+ +  + +FM ATM+IAVPTGVK+F+W++TMW
Sbjct: 304 GYMPMVWAMIAIGGLGFVVWAHHMYTVGMSLTQQSYFMLATMVIAVPTGVKIFSWIATMW 363

Query: 345 EGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFG 404
           +GSLTFETPMLFAI F+ LFT+GG +G++L+ A  D  YHDTY+VVAHFHYV+  GA+FG
Sbjct: 364 KGSLTFETPMLFAIGFLFLFTVGGVTGIVLSQAGVDRAYHDTYYVVAHFHYVMSLGAVFG 423

Query: 405 IFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFA 464
           IFA  Y+W+ K +G  Y E  GK+HFW  F+G N+ FFP HF+G  GMPRR  DY   F 
Sbjct: 424 IFAGIYFWIGKMSGRQYPEWAGKVHFWTFFIGTNITFFPQHFLGRQGMPRRYIDYPEAFG 483

Query: 465 DFNMVSSIGAFMFGATQIFFLFIVIKCI-RGGAPAPAKPW-DGAEGLEWSIPSPAPYHTF 522
            +N VSS GAF+  A+ +FF+ +V   I RG        W + A+ LEW++P+P P HTF
Sbjct: 484 LWNWVSSWGAFLSFASFLFFIGVVFYTITRGKRVEEENYWNEHADTLEWTLPNPPPEHTF 543

Query: 523 QTPP 526
           +  P
Sbjct: 544 EQLP 547