Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 661 a.a., cytochrome C oxidase from Burkholderia phytofirmans PsJN

 Score =  446 bits (1147), Expect = e-129
 Identities = 217/510 (42%), Positives = 312/510 (61%), Gaps = 6/510 (1%)

Query: 21  GLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMH 80
           G   W+ T +HK IG  YL  +FI  L+GG  A+++R +L +P   ++ P  +NQ+ TMH
Sbjct: 36  GWRGWLSTVDHKTIGLRYLVTAFIFLLMGGIEALIMRIQLARPNATVLTPEQYNQLFTMH 95

Query: 81  GLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGG 140
           G+ M+F   +P   G +N++ PL++G+ DMA PR+N  S+W+   A + L ++ F  G  
Sbjct: 96  GVTMIFLYALPVLSGFSNYLWPLVLGSRDMAFPRLNALSYWVFLFAGIFLYAS-FPTGQA 154

Query: 141 PNFGWTFYAPLSTTYAPASVTFFIFAIH--LMGISSIMGAINVIATILNLRAPGMTLMKM 198
           PN GW  YAPLS           ++A+   L+GIS+ +G++N + T+L +RAPGM+L +M
Sbjct: 155 PNAGWFNYAPLSGLEYSTGPNIDVYALGMVLLGISTTVGSMNFVVTLLRMRAPGMSLDRM 214

Query: 199 PLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHP 258
           P+ VW  L  +   +  +P ++    ++ +D   GT FF    GG P+L+QH+FW F HP
Sbjct: 215 PVLVWGTLTASGGNLLAVPSVSLAFFLLWLDRRIGTHFFDVLNGGRPLLWQHLFWIFAHP 274

Query: 259 EVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGE 318
            VY ++LPA G VS  +P F R+PL GY  +  +T A   + F+VW HHMF  GIP +  
Sbjct: 275 WVYAVVLPAMGIVSDALPVFCRRPLVGYGPVALSTVATMVIGFVVWIHHMFATGIPALAL 334

Query: 319 LFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAP 378
            FF  A+M+IA+P+ V  F W++T+W G   F  P LF   FV LF +GG SG+M A  P
Sbjct: 335 SFFGAASMVIAIPSAVATFAWIATIWTGRPVFRVPFLFFAGFVFLFVVGGVSGVMTAAVP 394

Query: 379 ADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMN 438
            D+Q  DTYFVVAH HYVL+   +F +    Y+W PK+TG M  E LGKL FW+ F G N
Sbjct: 395 FDWQLTDTYFVVAHLHYVLLGINVFPVIGGIYFWFPKFTGRMMSERLGKLGFWVLFAGFN 454

Query: 439 MAFFPMHFVGLAGMPRRIPDY--NLQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRGGA 496
           +AFFPMH  GL GMPRRI  Y  ++ +   N+V+S+G+F+F A  + F+  ++  ++ G 
Sbjct: 455 IAFFPMHIAGLLGMPRRIYTYPADMGWNTVNLVTSLGSFLFAAGVLIFMIDLLVSLKRGK 514

Query: 497 PAPAKPWDGAEGLEWSIPSPAPYHTFQTPP 526
           PA   PWD A  LEWS+ SP P + F   P
Sbjct: 515 PAGDNPWD-APTLEWSVSSPPPPYNFAVVP 543