Pairwise Alignments

Query, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

Subject, 314 a.a., alternative cytochrome C oxidase polypeptide II transmembrane protein from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 7/215 (3%)

Query: 47  FWICVIIGIVVFGAMFWSMVIHRRSTGQQAAHFHEHTWVEILWTVVPFLILVVMAIPATK 106
           FWI  I    V   M + ++  R   G  AA+  E+  +E          +  M  P   
Sbjct: 43  FWITGIAFTAVVLFMAYCVLRFRHRPGNTAAYEPENRRLEGWLATGTTFGVAAMLAPGLF 102

Query: 107 TLIDIYDASESDIDVQVTGYQWKWHYKYLGQDVEFFSNLA---TPTDQI---HNKAPKDE 160
                    +   +V+V G QW W ++  G D +  +       P + +    + A   +
Sbjct: 103 VWNQFVTVPQDASEVEVIGQQWLWSFRLPGADGKLGTTETRDIAPENTLGVNRDDAAGQD 162

Query: 161 HYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIEKPGIY 220
             ++E  + L LPVG  V+ L+ + DV+H ++VP F  K D +PG +   W    + G +
Sbjct: 163 DIIIEGGE-LHLPVGKPVKMLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWLTPTRTGTF 221

Query: 221 RGQCTELCGKDHGFMPVVVEVKSKADYDTWLGERK 255
              C ELCG  H  M   V V ++ DY  WL E++
Sbjct: 222 EILCAELCGVGHPQMRGTVVVDTEEDYQAWLAEQQ 256