Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 318 a.a., glycine betaine-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  251 bits (641), Expect = 2e-71
 Identities = 131/306 (42%), Positives = 185/306 (60%), Gaps = 4/306 (1%)

Query: 5   SAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKIDSLA 64
           + AV    L+A +A AA+ ++ C TV+ +D GW+DI +T A A  +LE+LGY+  +  L+
Sbjct: 12  AGAVCMATLTAGSAFAAEPES-CGTVRFSDVGWTDITATTATATTILEALGYETDVKVLS 70

Query: 65  VPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDYVWNA 124
           VP+ Y  LK+  +D FLGNWMP  +     +  +  V+ +  NL G ++TLA        
Sbjct: 71  VPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAKGAEL 130

Query: 125 GVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAMLAQV 184
           G+KDF D+  H  + D K+YGI  G   N  +  +++K  F+L  +++VESSEQ MLAQV
Sbjct: 131 GIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQV 190

Query: 185 DRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSK---GEVYTLTRKGYPQACPNA 241
            RA K    I FLGW PHPMN   K+ YL+GG+  FG       V+T  R GY   CPN 
Sbjct: 191 ARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNV 250

Query: 242 AKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADGDALE 301
            KLL NL F+L MEN IM ++++     ++AA AW+K +P+ ++ WL+GV TK  GD L 
Sbjct: 251 GKLLQNLSFSLQMENEIMGKILNDGEDPEKAAAAWLKDNPQSIEPWLSGVATKDGGDGLA 310

Query: 302 AVKAKL 307
           AVKA L
Sbjct: 311 AVKAAL 316