Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 331 a.a., glycine betaine ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 77/328 (23%), Positives = 125/328 (38%), Gaps = 55/328 (16%)

Query: 7   AVFALALSA---TTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQV-KIDS 62
           A+ A AL+A   TTA AAD   +  TVK      S+      +    LE LGY V K   
Sbjct: 5   AILATALTALISTTAFAADLPGKGITVKPIQSTISEETFQTLLVSRALEKLGYTVDKPSE 64

Query: 63  LAVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDYVW 122
           +   + Y  L  G       NW P      D + A G  ++  R  +G     A   Y+ 
Sbjct: 65  VDYNVGYTSLASGDATFTAVNWQPLHD---DMYAAAGGDKKFYR--QGVFVNGAAQGYLI 119

Query: 123 NAGVKDFADLQKHAGQFDK-------KLYGIGSGAPANLS-------LKAIIDKNEFNLG 168
           +    +    Q H    D+       KL+       A+L+        +A+I+      G
Sbjct: 120 DKKTAE----QYHIKSIDQLKDPKIAKLFDTNGDGKADLTGCTPGWGCEAVINHQLDAYG 175

Query: 169 QWKLVESSE---QAMLAQVDRAVKKQQFITFLGWTPHPMNVKLK-----------MHYLT 214
               V  ++    AM+A      K+ + + +  WTP+ ++  LK              L 
Sbjct: 176 LNNTVTHNQGNYAAMMADTIARYKEGKPVIYYTWTPYWVSDVLKPGKDVVWLQVPFSSLP 235

Query: 215 GGEKWFGSK-----------GEVYTLTRKGYPQACPNAAKLLGNLKFTL---DMENSIMA 260
           G +K   +K             ++ +  K + +  P AAKL   +K  +   + EN++M 
Sbjct: 236 GVQKNIDTKLSNGANYGFPVSTMHIVANKAWAEKNPAAAKLFSIMKLPIADINAENAMMH 295

Query: 261 EVVDKKISFDEAAKAWVKAHPERLDGWL 288
           E    +         W+KAH ++ DGW+
Sbjct: 296 EGHGSEADIQGHVDGWIKAHQQQFDGWV 323