Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  260 bits (664), Expect = 3e-74
 Identities = 136/298 (45%), Positives = 193/298 (64%), Gaps = 6/298 (2%)

Query: 12  ALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKIDSLAVPIIYGG 71
           ALS ++  AA+  A C  V+ AD GW+DIA+T  +A  +LE LGY+      +VPI + G
Sbjct: 11  ALSVSSVLAAEP-ATCRDVRFADVGWTDIAATTGLASTVLEGLGYKPTKTIASVPITFAG 69

Query: 72  LKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQL-SRNLEGTEFTLAVPDYVWNAGVKDFA 130
           +K  Q+D FLG W P      D F  +G +  L + NL G ++TLAVPDY + +G+K FA
Sbjct: 70  VKSKQIDVFLGYWSPTMDPMIDPFKKSGQLSVLPTPNLTGAKYTLAVPDYAYQSGIKTFA 129

Query: 131 DLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAMLAQVDRAVKK 190
           D+ K+  + D K+YGI  G   N  +K +ID N++ LG++KLVESSE  ML +V+RA++ 
Sbjct: 130 DIAKNYDKLDGKIYGIEPGNDGNALIKKMIDTNQYGLGKFKLVESSEAGMLVEVNRAIRD 189

Query: 191 QQFITFLGWTPHPMNVKLKMHYLTGGEKWFG---SKGEVYTLTRKGYPQACPNAAKLLGN 247
           ++ I FLGW PHPMNV++K+ YL+GG+  FG    + +V T+T   Y   CPN AKL+ N
Sbjct: 190 KKPIVFLGWEPHPMNVQMKIDYLSGGDAVFGPNYGEAKVLTVTPSDYSTRCPNVAKLVSN 249

Query: 248 LKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADGDALEAVKA 305
           L+FT D+EN +M  +++ K   ++AA+ W+KA+P  LD WLAGV T    D L AVKA
Sbjct: 250 LQFTTDIENHVMLPIMN-KTDPNKAAREWLKANPAVLDKWLAGVKTYDGKDGLPAVKA 306