Pairwise Alignments

Query, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (759), Expect = 3e-85
 Identities = 158/272 (58%), Positives = 189/272 (69%), Gaps = 3/272 (1%)

Query: 1   MDQYVVFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQGSGG-NV 59
           +DQY VFGNPI HSKSP IH LFA QT Q + Y     P+D F++ A+ FF QG  G NV
Sbjct: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64

Query: 60  TVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAG 119
           TVPFKEEA+R  D LT RAR AGAVNTL KL DG + GDNTDG GLV+DL     V L G
Sbjct: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQ-VLLKG 123

Query: 120 KRILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELGPVVASGFAWLQE 179
             IL++GAGGA RGVL+P+L  +P S+ + NRT  KAEQLA      G V A  F  L++
Sbjct: 124 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQ 183

Query: 180 PVDVIINATSASLAGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWATKLGAAKVLDGL 239
             DVIIN+TSASL GELP I D ++ + R+VCYDMMYGK  T F QWA + G A+ +DGL
Sbjct: 184 SYDVIINSTSASLDGELPAI-DPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242

Query: 240 GMLAEQAAEAFFIWRGVRPDTAPVLAELRRQL 271
           GML  QAAE+F +WRG+RP T  +L ELR+ L
Sbjct: 243 GMLVGQAAESFMLWRGLRPGTKQILRELRKNL 274