Pairwise Alignments

Query, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 287 a.a., shikimate 5-dehydrogenase from Burkholderia phytofirmans PsJN

 Score =  265 bits (678), Expect = 6e-76
 Identities = 154/277 (55%), Positives = 179/277 (64%), Gaps = 10/277 (3%)

Query: 2   DQYVVFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQGSGG-NVT 60
           D+Y V GNP+GHSKSP IH  FA QTG+ +EY  LLAP+D F    R F   G  G NVT
Sbjct: 8   DRYAVIGNPVGHSKSPFIHGRFAAQTGEAVEYGHLLAPVDAFVPHVRAFIDAGGRGLNVT 67

Query: 61  VPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAGK 120
           VPFK +A    D+L+PRA  AGAVNTL   A+G + GDNTDG GLVRD+ VN GV L G 
Sbjct: 68  VPFKLDAHAFADTLSPRAAAAGAVNTLRFDANG-IYGDNTDGFGLVRDIEVNLGVSLKGA 126

Query: 121 RILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELGPVVA------SGF 174
           RIL+LGAGGA RGV+ P+L   P +L I NRT EKAE L  +F +     A      S  
Sbjct: 127 RILLLGAGGAARGVVLPMLDRAPHTLTIVNRTAEKAEALVAQFAQAARDAACQLSGGSAR 186

Query: 175 AWLQEPVDVIINATSASLAGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWATKLGAAK 234
           A      DVI+NAT+ SL   LP   D     G T+ YDMMYG  PT F + A KLG A+
Sbjct: 187 AIEAGTYDVIVNATAGSLDASLPECDDRAFGNG-TLAYDMMYGAHPTVFMEHARKLG-AR 244

Query: 235 VLDGLGMLAEQAAEAFFIWRGVRPDTAPVLAELRRQL 271
             DGLGML EQAAE+F++WRGVRPD APVLAELR  L
Sbjct: 245 GADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALL 281