Pairwise Alignments

Query, 550 a.a., choline dehydrogenase from Pseudomonas putida KT2440

Subject, 551 a.a., choline dehydrogenase BetA from Phaeobacter inhibens DSM 17395

 Score =  346 bits (887), Expect = 2e-99
 Identities = 208/529 (39%), Positives = 294/529 (55%), Gaps = 9/529 (1%)

Query: 11  DYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRDNYPWIHIPVGYLYCIGNPRTDWCFK 70
           DYV+VGAG AGC +A RLS +    VL++E GG D  P+I +P    Y +     DW +K
Sbjct: 4   DYVIVGAGSAGCAMAYRLS-EAGKSVLVIEHGGTDAGPFIQMPGALSYPMNMSMYDWGYK 62

Query: 71  TEAQPGLGGRALGYPRGKVLGGCSSINGMIYMRGQAADYDHWAAQGNDGWAWKDVLPLFK 130
           ++ +P LGGR L  PRGKV+GG SSINGM+Y+RG A DY+HWA  G  GW++ DVLP FK
Sbjct: 63  SQPEPHLGGRELVCPRGKVVGGSSSINGMVYVRGHAGDYNHWAESGAAGWSYADVLPYFK 122

Query: 131 ASE----NHFAGASEHHGAEGEWRVERQRYSWPILDAFRDAAEQSGIGKVDDFNTGDNQG 186
             E        G  +  G +G   V R     P+  AF  A EQ+G     D+N    +G
Sbjct: 123 RMETWDDRGHGGDPDWRGTDGPLHVTRGPRDNPLHAAFVKAGEQAGYPVSKDYNGEQQEG 182

Query: 187 CGYFQVNQRSGVRWNASKAFLRPIKDRANLTVLTGVQVDQVLLDNTRARAVKALWQGAWH 246
            G  ++    G RW+A+ A+L+P   R N  ++  +   +V++++ RA  V+    G   
Sbjct: 183 FGPMEMTVYKGQRWSAANAYLKPALKRDNCEMIRAL-ARKVVIEDGRAVGVEVERGGKIE 241

Query: 247 EFAARREIILCAGAVGSPGILQRSGIGPRQLLESLGIGVRHDMPGVGGNLQDHLQLRLIY 306
              A  E+IL A ++ SP +L  SGIGP + L   GI V  D PGVG NLQDHL+    +
Sbjct: 242 VIRANAEVILAASSLNSPKLLMLSGIGPAKHLAEHGIDVVVDRPGVGQNLQDHLEFYFQF 301

Query: 307 QIRNTRTLNQMANSLWGKMGMGLRYLYDRSGPLAMAPSQLGAFVRSSPEQATANLQYHVQ 366
             +   TL +  N L+GK  +G ++L+ ++G  A    +  AF+RS       ++QYH  
Sbjct: 302 ASKQPITLFKYWN-LFGKALVGAQWLFTKTGLGASNQFESAAFIRSDKGVDYPDIQYHFL 360

Query: 367 PLSLERFGEPLHQFPAFTASVCNLRPASRGRIDICSTDMNSTPRIDPNYLSAPQDLRVAA 426
           P+++   G+   +   F A V  +R  SRG + + S D N  P+I  NY+S  +D     
Sbjct: 361 PIAVRYDGQAAAEGHGFQAHVGPMRSDSRGEVTLASADPNDAPKILFNYMSTEKDWEDFR 420

Query: 427 DAIRLTRRIVQAPALAAFEPKEYLPGPALQSEEDLFEAAGKIGTTIFHPVGTCRMG--NG 484
             IRLTR +    A+  F   E  PG ALQS+E+L     +   + +HP GTC+MG    
Sbjct: 421 KCIRLTREVFAQDAMKPFVKHEIQPGDALQSDEELNGFIREHVESAYHPCGTCKMGAVED 480

Query: 485 AMDVVDNQLRVHGIPGLRVADASIMPQITSGNTCSPTLMIAEKAAQLIL 533
            M VVD + RV G+ GLRVAD+SI P+IT+GN   P++M  EKA+  IL
Sbjct: 481 PMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMTGEKASDHIL 529