Pairwise Alignments

Query, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  613 bits (1581), Expect = e-180
 Identities = 298/447 (66%), Positives = 357/447 (79%), Gaps = 8/447 (1%)

Query: 1   MKIKVPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYN 60
           M  K    L A+S   GS  + AQ+E   EGFIEGS+L+++NRNFYFNRD RD       
Sbjct: 1   MSKKAVFSLTALSLALGSAPVFAQSETA-EGFIEGSTLSLINRNFYFNRDFRDG-----E 54

Query: 61  SGKGNTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVL 120
           S  GN  GYSE WAH +++ F SG+TQG+VG G DAFAM+GLKLD+G GR+G   S D+L
Sbjct: 55  SAAGN--GYSEEWAHGLMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLL 112

Query: 121 PVDNKGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENT 180
           P D+ G+  D++T+VGGA K RL DT +K GDVFP+TPVV  GDSRLLPESF+GVTV N 
Sbjct: 113 PHDSAGDPEDDFTRVGGAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNN 172

Query: 181 SIQGLTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWTVSVYAS 240
           S+  LTLQGGRLHAMSQP +SN+N++FVTFYGG V++PW+GY GGDYS+N+N ++S+Y S
Sbjct: 173 SLDDLTLQGGRLHAMSQPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNENISLSLYTS 232

Query: 241 QLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGA 300
           +LKD WNQ+Y G S  YPLSD +AL+  FNYYKA DEG++ LGEF+NNIWS+ +GV +GA
Sbjct: 233 RLKDAWNQHYFGASATYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGA 292

Query: 301 HTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGL 360
           HT+  S+QRNNG++DFDYLRQ+DSI+++NSIQYSDFNSPKE+SWMLRYDLN   YGIPGL
Sbjct: 293 HTVTASYQRNNGNNDFDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGL 352

Query: 361 TFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLR 420
           TFMTRYARG GADYSNAN+ YMR DDNG PL  Q RWERDVE +YVVQTG  KDLS R+R
Sbjct: 353 TFMTRYARGWGADYSNANEVYMRQDDNGAPLTGQNRWERDVEARYVVQTGSLKDLSLRVR 412

Query: 421 QATTRATAFESDLDETRVIIEYPLSIL 447
           QATTRATAFESDLDE R I EYPLSIL
Sbjct: 413 QATTRATAFESDLDEVRFIAEYPLSIL 439