Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 409 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (285), Expect = 5e-30
 Identities = 115/430 (26%), Positives = 184/430 (42%), Gaps = 42/430 (9%)

Query: 3   NKRKIALAVAAVAALGFGSLAWNNSSGQQA--ASTAEHGANDGHGD--EKKAASAAKEEG 58
           NK +       + A+GFG L    + G  A  A   EH A    G   +++A    +E+G
Sbjct: 6   NKTRFLQLSPLMRAMGFGVLISMTAVGGVALGAEGHEHKAESAKGQVSQEQAHDKEREQG 65

Query: 59  DEGH--GEEGHSEEGGEEEGKLTLSAEQIKAAGVALEAAAPRDLGTVVSFPGEIRFDEDR 116
           DE    GEE H        G+L LS EQ + AG+ +E  + +           +  D +R
Sbjct: 66  DEAALGGEEAHG-------GELVLSEEQRQLAGIRVEQVSSQGFSLAAVATATLVVDRER 118

Query: 117 TAHVVPRVPGVVEAVQANLGETVKKGQVLAVIASQQISDLRSEQQAAQRRVELARVTFER 176
           T  +VP++   V A     G+ V KGQ L  +    ++        AQ     A   + R
Sbjct: 119 TVTLVPQLDVRVLARHVVPGQEVAKGQPLLTLGGAAVAQ-------AQADYINAAAEWSR 171

Query: 177 EKQLWQDKISAEQDYLQARQALQEAEI------SLANAKQKVGAIGASVNSVGGNRYELR 230
            K++ Q  +SA     +  QA  +AE+      +L     ++ A+ +   ++G   Y+L 
Sbjct: 172 VKRMSQSAVSAS----RRLQAQVDAELKRAILGALKMTPAQIKALESDPETIGS--YQLL 225

Query: 231 APFDAVVVEKHLTVGEVVSEATNAFILSDLNQVWATFAVPPTDLGKVTTG--RAVKVSSP 288
           AP D  V +     G+V S  T    L+D + +W    V PT   ++  G    VKV   
Sbjct: 226 APLDGRVQQDVAMKGQVFSGGTALMQLTDESHLWVEAQVTPTQSQQIKVGSKALVKVGDF 285

Query: 289 DMNVEVEGKVGYVGSLLGEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPE 348
            +  EV G+   + S+     R   + V   NP      G F  I + +  ++  V +P+
Sbjct: 286 SLEAEVIGRSHEIDSV----TRTEQILVAFANPGHVLHAGQFAEIYL-ADNNQDGVILPD 340

Query: 349 HAVQTVEDKP-SVFVRTPDGFDTRPVKLGRRDNGYVEIIDGIEAGAQVATSGSFTLKSEL 407
            A+    D    VFV   DGF+   V++  R  G + ++ G+    +V  SG+F L SE 
Sbjct: 341 AALTRGGDGDWQVFVEEGDGFEAVEVEVSERQRG-MNLVQGLSPKMRVVVSGAFFLASEQ 399

Query: 408 GKASAE-HGH 416
            K+  + H H
Sbjct: 400 AKSGFDIHNH 409