Pairwise Alignments

Query, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

Subject, 1454 a.a., CusA/CzcA family heavy metal efflux RND transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score =  850 bits (2196), Expect = 0.0
 Identities = 457/1046 (43%), Positives = 671/1046 (64%), Gaps = 25/1046 (2%)

Query: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M  +II F++  ++++ + VL + G G Y   KLPIDA+PDIT+ QVQ+ T +P     +
Sbjct: 1    MLNKIIGFSVRNKLIIALFVLSLVGWGAYEVTKLPIDALPDITDNQVQVITVSPSLGAPD 60

Query: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120
             E+ ITFP+E + + + GL+Q RS SR GLS VT++F + TD+++ARQ I ERLQ  +++
Sbjct: 61   IERLITFPIEQSCSSISGLKQIRSFSRFGLSLVTIVFNEETDVYWARQQIAERLQQVQQE 120

Query: 121  LPEGVEA-VMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVP 179
            +P+G+ + VM PVSTGLGEI+ + V    G   +    Y    LR +QDWI++ QL   P
Sbjct: 121  IPQGIGSPVMAPVSTGLGEIYQYVVRPRKGYEGK----YDAQALRTVQDWIVRRQLLGTP 176

Query: 180  GVAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIR 239
            GVAE+++ GG  KQ+ VA    +L  Y LT+ ++  ALE NN N G  YIE+    L IR
Sbjct: 177  GVAEVSSFGGRLKQYEVAVKQDQLKAYGLTIAEIFDALEKNNENTGGAYIEKGPTVLYIR 236

Query: 240  APGQVGNIEDIANIVITSVD-GAPIRISSVADVSIGKELRTGAATENGREVVLGTVFMLI 298
            + G   ++ DI  IV+ ++D G P+ +  VA V  G  +R GA T N +  V G V M++
Sbjct: 237  SEGLTTSLADIEKIVVKTLDNGMPVLMGQVAKVQYGSAIRYGAMTYNAQGEVAGAVVMML 296

Query: 299  -GENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAI 357
             GENS  V + V  K+A+I + +P+GVV     DRT +V+ AI+TV+ NL+EGA++VI +
Sbjct: 297  KGENSSVVVKRVKDKIAEIQKMVPEGVVVEPFLDRTKMVDNAISTVETNLMEGALIVIFV 356

Query: 358  LFLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGALDFGIIVDGAVVIVENA 417
            L  FLGN+RA LI + VIPLSMLF    M    V  NLMSLGA+DFG+IVDG+V++VE  
Sbjct: 357  LVFFLGNLRAGLIVSSVIPLSMLFAIILMNTFGVGGNLMSLGAIDFGLIVDGSVIVVEAI 416

Query: 418  IRRLAHAQHKHGRMLTKTERFH---EVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEG 474
            + R +H+  KH R L + ++     EV  +     +  +F Q+II++VYLPI +L G+EG
Sbjct: 417  LHRFSHS--KHFRTLNRIDQNQMDAEVEKSTGSMIKSAVFSQIIILIVYLPILSLEGIEG 474

Query: 475  KMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEEGV---VMRTARLRYEPVLQ 531
            KMF PMA+T+  A+LGA +LS+T+VP   A+ +   +  ++ +   +M     RY+PVL 
Sbjct: 475  KMFKPMAWTIAFAILGAFILSITYVPMMSALCLNKVISHKKNLTDKLMAWIERRYQPVLG 534

Query: 532  WVLGHRNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQ 591
             VL       +  ++L  +S  +   +G EFIP L EGDFA++   + G++L  ++E  Q
Sbjct: 535  KVLYFPKTILAVTLSLFAISVFIMGTLGGEFIPQLEEGDFAVETRLLTGSNLNNTIETTQ 594

Query: 592  RLEKAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAE 651
            +  K ++ + PEV+++  + G+AE+ +DPMP  A D  ++LKP+ +W + K    EL A+
Sbjct: 595  KASKILLEKFPEVQKIVTKIGSAEVPTDPMPFEAGDMMVILKPKKEWTSAKS-FPELSAK 653

Query: 652  VQKAAAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAV 711
            + +A   +PG       P+Q+RFNEL++G R DV  K+FG+D+D L   A ++ A +  V
Sbjct: 654  MTEAVEVIPGITVGFQFPVQMRFNELMTGARQDVVCKIFGEDLDSLAIYAKRLGAIIGTV 713

Query: 712  PGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFD 771
             G+  V  EQ +G+P + I  +R+  A+YG+N+ DV   +  A  G+ AG +YEG++RFD
Sbjct: 714  NGAINVYEEQVTGMPQVVIKYNRDGMAKYGINVGDVNRVVNTAFAGQIAGQVYEGEKRFD 773

Query: 772  MVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGK 831
            MVVRL E  R D+  + +L++       +  NQ+   PLS VAN++   G NQI REN K
Sbjct: 774  MVVRLDEAARKDMRDVENLMV-----LTKSGNQV---PLSMVANIEEVEGVNQIQRENTK 825

Query: 832  RLVIVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVPVA 891
            R +IV  NV+ RD+ S VEE      +K+ +  GY  ++GG FE + +A  RL IVVP+A
Sbjct: 826  RRIIVGFNVKDRDVQSIVEELQQKAGQKLNLSKGYTISYGGSFENMTAAKSRLAIVVPIA 885

Query: 892  LLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVL 951
            LLL+  LL+  F+++K G+L++T IP +  GG++ALW+RD+P SISAGVGFIAL GVAVL
Sbjct: 886  LLLIFLLLYFAFSSVKQGLLIYTAIPLSAIGGILALWIRDLPFSISAGVGFIALFGVAVL 945

Query: 952  NGLVMIAFIRGLREEGRT-LRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQ 1010
            NG++++     L++EG T +++ V     ++LR VLMTALV SLGFIPMA++TG G  VQ
Sbjct: 946  NGILLVTEFNRLKKEGWTDVKRIVIHATKSKLRAVLMTALVPSLGFIPMAISTGAGGAVQ 1005

Query: 1011 RPLATVVIGGILSSTALTLLVLPALY 1036
            +PLATVVIGG+L ST LTL VLP LY
Sbjct: 1006 KPLATVVIGGLLVSTLLTLFVLPMLY 1031



 Score = 41.2 bits (95), Expect = 6e-07
 Identities = 61/315 (19%), Positives = 137/315 (43%), Gaps = 24/315 (7%)

Query: 203  LATYKLTLNDLVAALESNNANVGAGYI---ERNGEQLLIRAPGQVGNIEDIANIVITSVD 259
            +A Y + + D+   + +  A   AG +   E+  + ++        ++ D+ N+++ +  
Sbjct: 739  MAKYGINVGDVNRVVNTAFAGQIAGQVYEGEKRFDMVVRLDEAARKDMRDVENLMVLTKS 798

Query: 260  GAPIRISSVADVSIGKELRTGAATENGREVVLGTVFMLIGENSRTVSQAVAAKLADINRT 319
            G  + +S VA++   + +         R +++G  F +   + +++ + +  K A     
Sbjct: 799  GNQVPLSMVANIEEVEGVNQIQRENTKRRIIVG--FNVKDRDVQSIVEELQQK-AGQKLN 855

Query: 320  LPKGVVAVT--VYDRTNLVEKAIATVKKNLVEGAILVIAILFLF-LGNIRAALITAMVIP 376
            L KG        ++     +  +A V    V  A+L+I +L  F   +++  L+    IP
Sbjct: 856  LSKGYTISYGGSFENMTAAKSRLAIV----VPIALLLIFLLLYFAFSSVKQGLLIYTAIP 911

Query: 377  LSMLFTFTGMFNNKVSANLMS-LGALD-FGIIVDGAVVIVENAIRRLAHAQHKHGRMLTK 434
            LS +     ++   +  ++ + +G +  FG+ V   +++V    R       K G   T 
Sbjct: 912  LSAIGGILALWIRDLPFSISAGVGFIALFGVAVLNGILLVTEFNRL-----KKEG--WTD 964

Query: 435  TERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFHPMAFTVVMALLGAMVL 494
             +R   V  A +   R ++   L+  + ++P+   TG  G +  P+A  V+  LL + +L
Sbjct: 965  VKRI--VIHATKSKLRAVLMTALVPSLGFIPMAISTGAGGAVQKPLATVVIGGLLVSTLL 1022

Query: 495  SVTFVPAAIAMFVTG 509
            ++  +P    +F  G
Sbjct: 1023 TLFVLPMLYILFEKG 1037