Pairwise Alignments

Query, 224 a.a., two component heavy metal response regulator from Pseudomonas putida KT2440

Subject, 229 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  156 bits (394), Expect = 4e-43
 Identities = 92/224 (41%), Positives = 130/224 (58%), Gaps = 3/224 (1%)

Query: 1   MRVLVVEDEIKTAEYLQQGLSESGYVVDIVHNGVDALHLFNTNVYSLVLLDVNLPGIDGW 60
           MR+L+V+DE      L + L   GY VD+  +G     L     Y L++LD  LP   G 
Sbjct: 1   MRILLVDDEEALTAPLHRMLRREGYDVDVASDGQTGEQLATHQPYDLLILDWMLPERSGL 60

Query: 61  DLLETIRKTSR-VRIIMLTARGRINDKLKGLDGGADDYLVKPFEFPELLARIRSLQRRG- 118
           DL  ++R+  R V ++ LTAR  ++D+++GLD GADDYLVKPFE  ELLAR+R+L RR  
Sbjct: 61  DLCRSVRQRDRQVPVLFLTARDTVDDRVQGLDAGADDYLVKPFELKELLARVRALLRRSP 120

Query: 119 -DELVEKSSLKIADLELDSVRHRVFRGGTRIDLTTKEFALLHLLMSRTGEALTRSQIISL 177
             E  E   L   DLELD+     +R G RI+L+ KE  LL +LM   G+ ++  ++ + 
Sbjct: 121 RQETSEAPRLAGGDLELDTPNQLAYRQGRRIELSEKETQLLAVLMQHPGQLVSHQELQAQ 180

Query: 178 VWDMNFDCDTNVIDVAIRRLRSKIDDPFETKLIHTLRGVGYVFE 221
           VW       +NV+   IR LR K++ P ET LI ++ G GY F+
Sbjct: 181 VWGSANPPSSNVLAAQIRLLRRKLEAPGETPLIFSVYGKGYRFQ 224