Pairwise Alignments

Query, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

Subject, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 553/806 (68%), Positives = 662/806 (82%), Gaps = 3/806 (0%)

Query: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60
           MS N  YDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C D
Sbjct: 1   MSNN--YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKD 58

Query: 61  ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120
           I V IH D S+SV D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
Sbjct: 59  IVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 118

Query: 121 GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN 180
           GVSVVNALSEK++LT+ R GKI  QTY HGVPQAP+AVVG++E TGT + F PSA+TF N
Sbjct: 119 GVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTN 178

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERS-GKEEFFKYEGGLRAFVEYLNTNKTPVNS 239
           I F +DILAKR+RELSFLNSGV I L DER   K++ F YEGG++AFV +LN NKTP++ 
Sbjct: 179 IEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHE 238

Query: 240 QVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299
           +VFHFN +R+DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHL GFR +LTR+LN+Y+
Sbjct: 239 KVFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYM 298

Query: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359
           ++EG +KK + AT+GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  MN+  
Sbjct: 299 DKEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKL 358

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
           ADFL ENP+EAK V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPAL
Sbjct: 359 ADFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPAL 418

Query: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479
           SELY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCG
Sbjct: 419 SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCG 478

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKV 539
           IGR+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQ+PEL+ERGYIYIAQPPLYKV
Sbjct: 479 IGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKV 538

Query: 540 KRGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRL 599
           K+GKQEQYIKD+EAM +Y    A++ A LH++  APA++G  LE LV ++ + +K ++R+
Sbjct: 539 KKGKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERM 598

Query: 600 SRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKER 659
           SR YP  +    +Y+P +  E   D A ++AW  +   +LN+ +     Y+  +  + E 
Sbjct: 599 SRRYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAEL 658

Query: 660 NVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIV 719
           NV+LP++++ +HG+      + D   S +Y  + ++   L  L+  GA+++RGER + I 
Sbjct: 659 NVYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPIS 718

Query: 720 EFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIF 779
            F   LDWL+ E+ +  +IQRYKGLGEMNPDQLWETTMDP  RRM++VTIEDA+ AD++F
Sbjct: 719 SFAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELF 778

Query: 780 NTLMGDAVEPRRDFIESNALSVSNLD 805
            TLMGD VEPRR FIE+NAL V+NLD
Sbjct: 779 TTLMGDQVEPRRAFIETNALKVANLD 804