Pairwise Alignments

Query, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

Subject, 811 a.a., DNA gyrase subunit B from Sinorhizobium meliloti 1021

 Score =  891 bits (2302), Expect = 0.0
 Identities = 464/803 (57%), Positives = 588/803 (73%), Gaps = 11/803 (1%)

Query: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIH 66
           Y + SIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMV+EVVDN+IDEALAGH D +TV ++
Sbjct: 15  YGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGHADIVTVTLN 74

Query: 67  PDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126
           PD S++V DNGRGIP D+H+EEGVSAAEVIMT LHAGGKFD NSYKVSGGLHGVGVSVVN
Sbjct: 75  PDGSVTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVN 134

Query: 127 ALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSE-TTGTHIHFKPSAETFKNIHFSW 185
           ALS  L L +RR+GKI E ++ HGV   P+ V GD+   TGT + F PS +TF NI F +
Sbjct: 135 ALSVSLKLKIRRAGKIHEMSFTHGVADGPLKVTGDAGGETGTEVTFTPSEQTFSNIEFEF 194

Query: 186 DILAKRIRELSFLNSGVGILLKDERSG--KEEFFKYEGGLRAFVEYLNTNKTPVNSQVFH 243
             L  R+REL+FLNSGV I+L D+R    + E   Y+GGL AFV YL+  K P+  +   
Sbjct: 195 GTLEHRLRELAFLNSGVRIVLTDKRHSDIRREEMMYDGGLEAFVAYLDRAKKPLVQKPVS 254

Query: 244 FNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQEG 303
              ++D G+ VEVA+ WNDS++EN+LCFTNNIPQRDGGTH+ GFR +LTR + SY +  G
Sbjct: 255 IRGEKD-GITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGALTRQITSYADTSG 313

Query: 304 LAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADFL 363
           + KK KV+ TGDD REGLTA++SVKVPDPKFSSQTKDKLVSSEV+  VE  +N+  + +L
Sbjct: 314 ITKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVESLVNEALSVWL 373

Query: 364 LENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELY 423
            E+P++AK +VGK+++AA AREAARKARE+TRRKGALDI+ LPGKLADC E+DPA SEL+
Sbjct: 374 EEHPSDAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKLADCSERDPAKSELF 433

Query: 424 LVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRE 483
           LVEGDSAGGSAKQGR+R  QAILPL+GKILNVE+ARFDKM+SSQE+GTLITALG  IG++
Sbjct: 434 LVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTSIGKD 493

Query: 484 EYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKRGK 543
           E+N DKLRYH IIIMTDADVDG+HIRTLLLTFFFRQ+PEL+ERG++YIAQPPLYKV RGK
Sbjct: 494 EFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLYIAQPPLYKVARGK 553

Query: 544 QEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSRLY 603
             QY+KD++A+E+Y+    LE+ASL L      V G  L  ++N+   +   ++ L   Y
Sbjct: 554 SVQYLKDEKALEDYLISMGLEEASLELASGEVRV-GQDLREVINDALRLRSLMEGLHSRY 612

Query: 604 PEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLN-SSQKSGLAYNASLREDKERNVW 662
              + E       + +E  G+    Q   A+   RL+  ++++   + A++  +      
Sbjct: 613 NRSVVEQAAIAGALNVELNGERDEYQLIAAEVARRLDVIAEETERGWEAAVTAEGGL--- 669

Query: 663 LPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVEFK 722
             ++E    G+      +    GS+D R +  + A+L  + G    ++R +  + I   +
Sbjct: 670 --KLERMVRGVKEAAVLDMALIGSSDARHIDQLKARLKEVYGAPPVLRRRDGTQEISGPR 727

Query: 723 EGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTL 782
             LD +     K  T+QRYKGLGEMN +QLWETT+DP VR +L+V + DA  AD +F+ L
Sbjct: 728 ALLDAIFAAGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVTDATDADGLFSRL 787

Query: 783 MGDAVEPRRDFIESNALSVSNLD 805
           MGD VEPRRDFI+ NALSV+NLD
Sbjct: 788 MGDEVEPRRDFIQENALSVANLD 810